Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BUD13BUD13 isoform 1. (607 aa)    
Predicted Functional Partners:
RBMX2
RBMX2 isoform 1.
   
 0.996
SNIP1
Smad nuclear interacting protein 1.
   
 0.990
CR201_G0052914
GPKOW isoform 1.
   
 
 0.968
DHX16
DEAH-box helicase 16.
   
 0.938
MFAP1
MFAP1 isoform 1.
   
 0.936
CWC22
Pre-mRNA-splicing factor CWC22 homolog; Required for pre-mRNA splicing as component of the spliceosome. Promotes exon-junction complex (EJC) assembly. Hinders EIF4A3 from non-specifically binding RNA and escorts it to the splicing machinery to promote EJC assembly on mature mRNAs. Through its role in EJC assembly, required for nonsense-mediated mRNA decay.
   
 0.919
PRPF8
Pre-mRNA processing factor 8.
    
 0.905
SF3B1
SF3B1 isoform 1.
    
 0.895
SF3B2
SF3B2 isoform 4.
    
 0.888
SF3A1
Splicing factor 3a subunit 1.
    
 0.884
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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