Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CNOT1 | DCP1A | ENSPPYP00000008374 | ENSPPYP00000015428 | CCR4-NOT transcription complex subunit 1. | DCP1A isoform 1. | 0.401 |
| CNOT1 | DDX6 | ENSPPYP00000008374 | ENSPPYP00000004516 | CCR4-NOT transcription complex subunit 1. | Probable ATP-dependent RNA helicase DDX6; In the process of mRNA degradation, may play a role in mRNA decapping. | 0.983 |
| CNOT1 | EDC3 | ENSPPYP00000008374 | ENSPPYP00000007534 | CCR4-NOT transcription complex subunit 1. | Enhancer of mRNA-decapping protein 3; Binds single-stranded RNA. Involved in the process of mRNA degradation and in the positive regulation of mRNA decapping (By similarity); Belongs to the EDC3 family. | 0.437 |
| CNOT1 | EDC4 | ENSPPYP00000008374 | ENSPPYP00000008440 | CCR4-NOT transcription complex subunit 1. | Enhancer of mRNA decapping 4. | 0.603 |
| CNOT1 | ENSPPYP00000017543 | ENSPPYP00000008374 | ENSPPYP00000017543 | CCR4-NOT transcription complex subunit 1. | annotation not available | 0.482 |
| CNOT1 | LSM1 | ENSPPYP00000008374 | ENSPPYP00000020761 | CCR4-NOT transcription complex subunit 1. | U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation. | 0.497 |
| CNOT1 | LSM14A | ENSPPYP00000008374 | ENSPPYP00000011009 | CCR4-NOT transcription complex subunit 1. | Protein LSM14 homolog A; Essential for formation of P-bodies, cytoplasmic structures that provide storage sites for non-translating mRNAs. Belongs to the LSM14 family. | 0.529 |
| CNOT1 | PATL1 | ENSPPYP00000008374 | ENSPPYP00000003720 | CCR4-NOT transcription complex subunit 1. | Protein PAT1 homolog 1; RNA-binding protein involved in deadenylation-dependent decapping of mRNAs, leading to the degradation of mRNAs. Acts as a scaffold protein that connects deadenylation and decapping machinery. Required for cytoplasmic mRNA processing body (P-body) assembly (By similarity); Belongs to the PAT1 family. | 0.995 |
| DCP1A | CNOT1 | ENSPPYP00000015428 | ENSPPYP00000008374 | DCP1A isoform 1. | CCR4-NOT transcription complex subunit 1. | 0.401 |
| DCP1A | DCP1B | ENSPPYP00000015428 | ENSPPYP00000004723 | DCP1A isoform 1. | mRNA-decapping enzyme 1B; May play a role in the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. May remove the 7- methyl guanine cap structure from mRNA molecules, yielding a 5'- phosphorylated mRNA fragment and 7m-GDP (By similarity). | 0.998 |
| DCP1A | DDX6 | ENSPPYP00000015428 | ENSPPYP00000004516 | DCP1A isoform 1. | Probable ATP-dependent RNA helicase DDX6; In the process of mRNA degradation, may play a role in mRNA decapping. | 0.997 |
| DCP1A | EDC3 | ENSPPYP00000015428 | ENSPPYP00000007534 | DCP1A isoform 1. | Enhancer of mRNA-decapping protein 3; Binds single-stranded RNA. Involved in the process of mRNA degradation and in the positive regulation of mRNA decapping (By similarity); Belongs to the EDC3 family. | 0.997 |
| DCP1A | EDC4 | ENSPPYP00000015428 | ENSPPYP00000008440 | DCP1A isoform 1. | Enhancer of mRNA decapping 4. | 0.998 |
| DCP1A | ENSPPYP00000017543 | ENSPPYP00000015428 | ENSPPYP00000017543 | DCP1A isoform 1. | annotation not available | 0.999 |
| DCP1A | LSM1 | ENSPPYP00000015428 | ENSPPYP00000020761 | DCP1A isoform 1. | U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation. | 0.798 |
| DCP1A | LSM14A | ENSPPYP00000015428 | ENSPPYP00000011009 | DCP1A isoform 1. | Protein LSM14 homolog A; Essential for formation of P-bodies, cytoplasmic structures that provide storage sites for non-translating mRNAs. Belongs to the LSM14 family. | 0.753 |
| DCP1A | LSM7 | ENSPPYP00000015428 | ENSPPYP00000010490 | DCP1A isoform 1. | LSM7 isoform 1. | 0.675 |
| DCP1A | PATL1 | ENSPPYP00000015428 | ENSPPYP00000003720 | DCP1A isoform 1. | Protein PAT1 homolog 1; RNA-binding protein involved in deadenylation-dependent decapping of mRNAs, leading to the degradation of mRNAs. Acts as a scaffold protein that connects deadenylation and decapping machinery. Required for cytoplasmic mRNA processing body (P-body) assembly (By similarity); Belongs to the PAT1 family. | 0.996 |
| DCP1B | DCP1A | ENSPPYP00000004723 | ENSPPYP00000015428 | mRNA-decapping enzyme 1B; May play a role in the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. May remove the 7- methyl guanine cap structure from mRNA molecules, yielding a 5'- phosphorylated mRNA fragment and 7m-GDP (By similarity). | DCP1A isoform 1. | 0.998 |
| DCP1B | DDX6 | ENSPPYP00000004723 | ENSPPYP00000004516 | mRNA-decapping enzyme 1B; May play a role in the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. May remove the 7- methyl guanine cap structure from mRNA molecules, yielding a 5'- phosphorylated mRNA fragment and 7m-GDP (By similarity). | Probable ATP-dependent RNA helicase DDX6; In the process of mRNA degradation, may play a role in mRNA decapping. | 0.992 |
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