STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CR201_G0026161USH1C isoform 8. (559 aa)    
Predicted Functional Partners:
ANKS4B
Ankyrin repeat and sterile alpha motif domain containing 4B.
    
 0.697
USH1G
USH1G isoform 1.
    
 0.697
CR201_G0030294
CDH23 isoform 6.
   
 
 0.572
CDH23
CDH23 isoform 1.
   
 
 0.572
CDHR2
CDHR2 isoform 1.
   
 
 0.572
IFT80
IFT80 isoform 1.
   
 0.534
IFT88
IFT88 isoform 2.
   
 0.532
IFT57
Intraflagellar transport 57.
    
 0.529
TRAF3IP1
TRAF3IP1 isoform 2.
    
 0.522
IFT172
IFT172 isoform 1.
    
 0.516
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.