STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP5Ubiquitin carboxyl-terminal hydrolase 5; Cleaves linear and branched multiubiquitin polymers with a marked preference for branched polymers. Involved in unanchored 'Lys- 48'-linked polyubiquitin disassembly. Binds linear and 'Lys-63'-linked polyubiquitin with a lower affinity (By similarity). (840 aa)    
Predicted Functional Partners:
UBC
UBC isoform 2.
    
 0.990
UBA52
UBA52 isoform 10.
    
 0.848
CR201_G0003353
RPS27A isoform 1.
    
 0.764
ENSPPYP00000023500
annotation not available
    
 0.764
ENSPPYP00000023562
annotation not available
    
 0.764
CR201_G0053435
UBB isoform 1.
    
 0.760
ENSPPYP00000009931
annotation not available
    
 0.712
PPP5C
Serine/threonine-protein phosphatase.
   
    0.701
RAD23A
RAD23A isoform 1.
    
 0.698
CACNA1H
CACNA1H isoform 2.
    
 
 0.672
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.