Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABCD1 | ABCD2 | ENSPPYP00000023337 | ENSPPYP00000005037 | ABCD1 isoform 1. | ATP binding cassette subfamily D member 2. | 0.992 |
ABCD1 | ABCD3 | ENSPPYP00000023337 | ENSPPYP00000024157 | ABCD1 isoform 1. | ABCD3 isoform 4. | 0.958 |
ABCD1 | ABCD4 | ENSPPYP00000023337 | ENSPPYP00000006803 | ABCD1 isoform 1. | ATP binding cassette subfamily D member 4. | 0.960 |
ABCD1 | ACSBG1 | ENSPPYP00000023337 | ENSPPYP00000007595 | ABCD1 isoform 1. | Acyl-CoA synthetase bubblegum family member 1. | 0.717 |
ABCD1 | PEX13 | ENSPPYP00000023337 | ENSPPYP00000013816 | ABCD1 isoform 1. | Peroxisomal biogenesis factor 13. | 0.717 |
ABCD1 | PEX14 | ENSPPYP00000023337 | ENSPPYP00000002199 | ABCD1 isoform 1. | PEX14 isoform 2. | 0.658 |
ABCD1 | PEX19 | ENSPPYP00000023337 | ENSPPYP00000000743 | ABCD1 isoform 1. | Peroxisomal biogenesis factor 19; Necessary for early peroxisomal biogenesis. Acts both as a cytosolic chaperone and as an import receptor for peroxisomal membrane proteins (PMPs). Binds and stabilizes newly synthesized PMPs in the cytoplasm by interacting with their hydrophobic membrane-spanning domains, and targets them to the peroxisome membrane by binding to the integral membrane protein PEX3. Excludes CDKN2A from the nucleus and prevents its interaction with MDM2, which results in active degradation of TP53. | 0.879 |
ABCD1 | PEX3 | ENSPPYP00000023337 | ENSPPYP00000019104 | ABCD1 isoform 1. | Peroxisomal biogenesis factor 3. | 0.817 |
ABCD1 | SLC25A17 | ENSPPYP00000023337 | ENSPPYP00000013230 | ABCD1 isoform 1. | Solute carrier family 25 member 17; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.671 |
ABCD1 | SLC27A2 | ENSPPYP00000023337 | ENSPPYP00000024675 | ABCD1 isoform 1. | SLC27A2 isoform 1. | 0.705 |
ABCD2 | ABCD1 | ENSPPYP00000005037 | ENSPPYP00000023337 | ATP binding cassette subfamily D member 2. | ABCD1 isoform 1. | 0.992 |
ABCD2 | ABCD3 | ENSPPYP00000005037 | ENSPPYP00000024157 | ATP binding cassette subfamily D member 2. | ABCD3 isoform 4. | 0.931 |
ABCD2 | ABCD4 | ENSPPYP00000005037 | ENSPPYP00000006803 | ATP binding cassette subfamily D member 2. | ATP binding cassette subfamily D member 4. | 0.960 |
ABCD2 | ACSBG1 | ENSPPYP00000005037 | ENSPPYP00000007595 | ATP binding cassette subfamily D member 2. | Acyl-CoA synthetase bubblegum family member 1. | 0.693 |
ABCD2 | PEX13 | ENSPPYP00000005037 | ENSPPYP00000013816 | ATP binding cassette subfamily D member 2. | Peroxisomal biogenesis factor 13. | 0.654 |
ABCD2 | PEX14 | ENSPPYP00000005037 | ENSPPYP00000002199 | ATP binding cassette subfamily D member 2. | PEX14 isoform 2. | 0.642 |
ABCD2 | PEX19 | ENSPPYP00000005037 | ENSPPYP00000000743 | ATP binding cassette subfamily D member 2. | Peroxisomal biogenesis factor 19; Necessary for early peroxisomal biogenesis. Acts both as a cytosolic chaperone and as an import receptor for peroxisomal membrane proteins (PMPs). Binds and stabilizes newly synthesized PMPs in the cytoplasm by interacting with their hydrophobic membrane-spanning domains, and targets them to the peroxisome membrane by binding to the integral membrane protein PEX3. Excludes CDKN2A from the nucleus and prevents its interaction with MDM2, which results in active degradation of TP53. | 0.807 |
ABCD2 | PEX3 | ENSPPYP00000005037 | ENSPPYP00000019104 | ATP binding cassette subfamily D member 2. | Peroxisomal biogenesis factor 3. | 0.710 |
ABCD2 | SLC25A17 | ENSPPYP00000005037 | ENSPPYP00000013230 | ATP binding cassette subfamily D member 2. | Solute carrier family 25 member 17; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.640 |
ABCD2 | SLC27A2 | ENSPPYP00000005037 | ENSPPYP00000024675 | ATP binding cassette subfamily D member 2. | SLC27A2 isoform 1. | 0.632 |
page 1 of 5