Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APPL1 | APPL2 | ENSPPYP00000015409 | ENSPPYP00000005592 | APPL1 isoform 1. | APPL2 isoform 1. | 0.928 |
APPL1 | RAB5A | ENSPPYP00000015409 | ENSPPYP00000015744 | APPL1 isoform 1. | RAB5A, member RAS oncogene family. | 0.983 |
APPL1 | RAB5B | ENSPPYP00000015409 | ENSPPYP00000005284 | APPL1 isoform 1. | Ras-related protein Rab-5B; Protein transport. Probably involved in vesicular traffic (By similarity). | 0.803 |
APPL1 | RAB5C | ENSPPYP00000015409 | ENSPPYP00000009444 | APPL1 isoform 1. | Ras-related protein Rab-5C; Protein transport. Probably involved in vesicular traffic (By similarity); Belongs to the small GTPase superfamily. Rab family. | 0.789 |
APPL2 | APPL1 | ENSPPYP00000005592 | ENSPPYP00000015409 | APPL2 isoform 1. | APPL1 isoform 1. | 0.928 |
APPL2 | RAB5A | ENSPPYP00000005592 | ENSPPYP00000015744 | APPL2 isoform 1. | RAB5A, member RAS oncogene family. | 0.805 |
APPL2 | RAB5B | ENSPPYP00000005592 | ENSPPYP00000005284 | APPL2 isoform 1. | Ras-related protein Rab-5B; Protein transport. Probably involved in vesicular traffic (By similarity). | 0.802 |
APPL2 | RAB5C | ENSPPYP00000005592 | ENSPPYP00000009444 | APPL2 isoform 1. | Ras-related protein Rab-5C; Protein transport. Probably involved in vesicular traffic (By similarity); Belongs to the small GTPase superfamily. Rab family. | 0.792 |
LRRK2 | NBR1 | ENSPPYP00000023875 | ENSPPYP00000009400 | LRRK2 isoform 3. | Next to BRCA1 gene 1 protein; Acts probably as a receptor for selective autophagosomal degradation of ubiquitinated targets. | 0.402 |
LRRK2 | RAB5B | ENSPPYP00000023875 | ENSPPYP00000005284 | LRRK2 isoform 3. | Ras-related protein Rab-5B; Protein transport. Probably involved in vesicular traffic (By similarity). | 0.832 |
NBR1 | LRRK2 | ENSPPYP00000009400 | ENSPPYP00000023875 | Next to BRCA1 gene 1 protein; Acts probably as a receptor for selective autophagosomal degradation of ubiquitinated targets. | LRRK2 isoform 3. | 0.402 |
NBR1 | PIK3C3 | ENSPPYP00000009400 | ENSPPYP00000010247 | Next to BRCA1 gene 1 protein; Acts probably as a receptor for selective autophagosomal degradation of ubiquitinated targets. | Phosphatidylinositol 3-kinase catalytic subunit type 3. | 0.501 |
NBR1 | RAB5B | ENSPPYP00000009400 | ENSPPYP00000005284 | Next to BRCA1 gene 1 protein; Acts probably as a receptor for selective autophagosomal degradation of ubiquitinated targets. | Ras-related protein Rab-5B; Protein transport. Probably involved in vesicular traffic (By similarity). | 0.769 |
PIK3C3 | NBR1 | ENSPPYP00000010247 | ENSPPYP00000009400 | Phosphatidylinositol 3-kinase catalytic subunit type 3. | Next to BRCA1 gene 1 protein; Acts probably as a receptor for selective autophagosomal degradation of ubiquitinated targets. | 0.501 |
PIK3C3 | RAB5A | ENSPPYP00000010247 | ENSPPYP00000015744 | Phosphatidylinositol 3-kinase catalytic subunit type 3. | RAB5A, member RAS oncogene family. | 0.997 |
PIK3C3 | RAB5B | ENSPPYP00000010247 | ENSPPYP00000005284 | Phosphatidylinositol 3-kinase catalytic subunit type 3. | Ras-related protein Rab-5B; Protein transport. Probably involved in vesicular traffic (By similarity). | 0.954 |
PIK3C3 | RAB5C | ENSPPYP00000010247 | ENSPPYP00000009444 | Phosphatidylinositol 3-kinase catalytic subunit type 3. | Ras-related protein Rab-5C; Protein transport. Probably involved in vesicular traffic (By similarity); Belongs to the small GTPase superfamily. Rab family. | 0.954 |
RAB5A | APPL1 | ENSPPYP00000015744 | ENSPPYP00000015409 | RAB5A, member RAS oncogene family. | APPL1 isoform 1. | 0.983 |
RAB5A | APPL2 | ENSPPYP00000015744 | ENSPPYP00000005592 | RAB5A, member RAS oncogene family. | APPL2 isoform 1. | 0.805 |
RAB5A | PIK3C3 | ENSPPYP00000015744 | ENSPPYP00000010247 | RAB5A, member RAS oncogene family. | Phosphatidylinositol 3-kinase catalytic subunit type 3. | 0.997 |
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