Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NAPB | SNAP23 | ENSPPYP00000012031 | ENSPPYP00000007248 | NAPB isoform 4. | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | 0.803 |
NAPB | SNAP25 | ENSPPYP00000012031 | ENSPPYP00000011970 | NAPB isoform 4. | Synaptosomal-associated protein 25; t-SNARE involved in the molecular regulation of neurotransmitter release. May play an important role in the synaptic function of specific neuronal systems. Associates with proteins involved in vesicle docking and membrane fusion. Regulates plasma membrane recycling through its interaction with CENPF. Modulates the gating characteristics of the delayed rectifier voltage-dependent potassium channel KCNB1 in pancreatic beta cells. | 0.952 |
NAPB | STX1A | ENSPPYP00000012031 | ENSPPYP00000019613 | NAPB isoform 4. | Syntaxin-1A; Plays an essential role in hormone and neurotransmitter calcium-dependent exocytosis and endocytosis. Part of the SNARE (Soluble NSF Attachment Receptor) complex composed of SNAP25, STX1A and VAMP2 which mediates the fusion of synaptic vesicles with the presynaptic plasma membrane. STX1A and SNAP25 are localized on the plasma membrane while VAMP2 resides in synaptic vesicles. The pairing of the three SNAREs from the N-terminal SNARE motifs to the C-terminal anchors leads to the formation of the SNARE complex, which brings membranes into close proximity and results in final [...] | 0.891 |
NAPB | STX1B | ENSPPYP00000012031 | ENSPPYP00000008248 | NAPB isoform 4. | STX1B isoform 1; Belongs to the syntaxin family. | 0.861 |
NAPB | VAMP1 | ENSPPYP00000012031 | ENSPPYP00000004772 | NAPB isoform 4. | Vesicle associated membrane protein 1. | 0.859 |
NAPB | VAMP2 | ENSPPYP00000012031 | ENSPPYP00000008938 | NAPB isoform 4. | VAMP2 isoform 2. | 0.933 |
NAPB | VAMP3 | ENSPPYP00000012031 | ENSPPYP00000002240 | NAPB isoform 4. | Vesicle associated membrane protein 3. | 0.883 |
NAPB | VAMP7 | ENSPPYP00000012031 | ENSPPYP00000023405 | NAPB isoform 4. | Vesicle-associated membrane protein 7; Involved in the targeting and/or fusion of transport vesicles to their target membrane during transport of proteins from the early endosome to the lysosome. Required for heterotypic fusion of late endosomes with lysosomes and homotypic lysosomal fusion. Required for calcium regulated lysosomal exocytosis. Involved in the export of chylomicrons from the endoplasmic reticulum to the cis Golgi. Required for exocytosis of mediators during eosinophil and neutrophil degranulation, and target cell killing by natural killer cells. Required for focal exocy [...] | 0.728 |
RIMS2 | SNAP23 | ENSPPYP00000021101 | ENSPPYP00000007248 | Regulating synaptic membrane exocytosis 2. | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | 0.724 |
RIMS2 | SNAP25 | ENSPPYP00000021101 | ENSPPYP00000011970 | Regulating synaptic membrane exocytosis 2. | Synaptosomal-associated protein 25; t-SNARE involved in the molecular regulation of neurotransmitter release. May play an important role in the synaptic function of specific neuronal systems. Associates with proteins involved in vesicle docking and membrane fusion. Regulates plasma membrane recycling through its interaction with CENPF. Modulates the gating characteristics of the delayed rectifier voltage-dependent potassium channel KCNB1 in pancreatic beta cells. | 0.736 |
RIMS2 | STX1A | ENSPPYP00000021101 | ENSPPYP00000019613 | Regulating synaptic membrane exocytosis 2. | Syntaxin-1A; Plays an essential role in hormone and neurotransmitter calcium-dependent exocytosis and endocytosis. Part of the SNARE (Soluble NSF Attachment Receptor) complex composed of SNAP25, STX1A and VAMP2 which mediates the fusion of synaptic vesicles with the presynaptic plasma membrane. STX1A and SNAP25 are localized on the plasma membrane while VAMP2 resides in synaptic vesicles. The pairing of the three SNAREs from the N-terminal SNARE motifs to the C-terminal anchors leads to the formation of the SNARE complex, which brings membranes into close proximity and results in final [...] | 0.919 |
RIMS2 | STX1B | ENSPPYP00000021101 | ENSPPYP00000008248 | Regulating synaptic membrane exocytosis 2. | STX1B isoform 1; Belongs to the syntaxin family. | 0.919 |
RIMS2 | STXBP1 | ENSPPYP00000021101 | ENSPPYP00000021991 | Regulating synaptic membrane exocytosis 2. | Syntaxin-binding protein 1; May participate in the regulation of synaptic vesicle docking and fusion, possibly through interaction with GTP-binding proteins. Essential for neurotransmission and binds syntaxin, a component of the synaptic vesicle fusion machinery probably in a 1:1 ratio. Can interact with syntaxins 1, 2, and 3 but not syntaxin 4. May play a role in determining the specificity of intracellular fusion reactions (By similarity). | 0.932 |
RIMS2 | VAMP1 | ENSPPYP00000021101 | ENSPPYP00000004772 | Regulating synaptic membrane exocytosis 2. | Vesicle associated membrane protein 1. | 0.739 |
RIMS2 | VAMP2 | ENSPPYP00000021101 | ENSPPYP00000008938 | Regulating synaptic membrane exocytosis 2. | VAMP2 isoform 2. | 0.739 |
RIMS2 | VAMP3 | ENSPPYP00000021101 | ENSPPYP00000002240 | Regulating synaptic membrane exocytosis 2. | Vesicle associated membrane protein 3. | 0.739 |
SNAP23 | NAPB | ENSPPYP00000007248 | ENSPPYP00000012031 | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | NAPB isoform 4. | 0.803 |
SNAP23 | RIMS2 | ENSPPYP00000007248 | ENSPPYP00000021101 | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | Regulating synaptic membrane exocytosis 2. | 0.724 |
SNAP23 | SNAP25 | ENSPPYP00000007248 | ENSPPYP00000011970 | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | Synaptosomal-associated protein 25; t-SNARE involved in the molecular regulation of neurotransmitter release. May play an important role in the synaptic function of specific neuronal systems. Associates with proteins involved in vesicle docking and membrane fusion. Regulates plasma membrane recycling through its interaction with CENPF. Modulates the gating characteristics of the delayed rectifier voltage-dependent potassium channel KCNB1 in pancreatic beta cells. | 0.476 |
SNAP23 | STX1A | ENSPPYP00000007248 | ENSPPYP00000019613 | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | Syntaxin-1A; Plays an essential role in hormone and neurotransmitter calcium-dependent exocytosis and endocytosis. Part of the SNARE (Soluble NSF Attachment Receptor) complex composed of SNAP25, STX1A and VAMP2 which mediates the fusion of synaptic vesicles with the presynaptic plasma membrane. STX1A and SNAP25 are localized on the plasma membrane while VAMP2 resides in synaptic vesicles. The pairing of the three SNAREs from the N-terminal SNARE motifs to the C-terminal anchors leads to the formation of the SNARE complex, which brings membranes into close proximity and results in final [...] | 0.997 |
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