STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CR201_G0047047SMG1 isoform 2. (163 aa)    
Predicted Functional Partners:
SMG1
SMG1 isoform 8; Belongs to the PI3/PI4-kinase family.
 
     0.916
SMG9
SMG9 nonsense mediated mRNA decay factor.
    
 0.893
SMG8
Protein SMG8.
   
 0.892
SMG7
SMG7 nonsense mediated mRNA decay factor.
   
 0.885
RPTOR
RPTOR isoform 4.
   
 0.881
RICTOR
RICTOR isoform 1.
   
 0.880
MLST8
MTOR associated protein, LST8 homolog.
    
 0.871
MAPKAP1
Target of rapamycin complex 2 subunit MAPKAP1; Subunit of mTORC2, which regulates cell growth and survival in response to hormonal signals. mTORC2 is activated by growth factors, but, in contrast to mTORC1, seems to be nutrient-insensitive. mTORC2 seems to function upstream of Rho GTPases to regulate the actin cytoskeleton, probably by activating one or more Rho-type guanine nucleotide exchange factors. mTORC2 promotes the serum-induced formation of stress-fibers or F-actin. mTORC2 plays a critical role in AKT1 'Ser-473' phosphorylation, which may facilitate the phosphorylation of the [...]
    
 0.871
UPF2
UPF2 isoform 1.
   
 
 0.835
UPF1
UPF1 isoform 2.
   
 
 0.824
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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