Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CR201_G0003005 | DCTN2 | ENSPPYP00000013691 | ENSPPYP00000005347 | T0009947 isoform 1. | DCTN2 isoform 1. | 0.999 |
CR201_G0003005 | DYNC1I1 | ENSPPYP00000013691 | ENSPPYP00000019951 | T0009947 isoform 1. | Dynein cytoplasmic 1 intermediate chain 1. | 0.995 |
CR201_G0003005 | DYNC1I2 | ENSPPYP00000013691 | ENSPPYP00000014432 | T0009947 isoform 1. | Cytoplasmic dynein 1 intermediate chain 2; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and help dynein bind to dynactin 150 kDa component (By similarity). organelles along microtubules. The intermediate chains mediate the binding of dynein to dynactin via its 150 kDa component (p150-glued) DCNT1. Involved in membrane-transport, such a [...] | 0.992 |
CR201_G0003005 | DYNLL1 | ENSPPYP00000013691 | ENSPPYP00000005735 | T0009947 isoform 1. | Dynein light chain. | 0.938 |
CR201_G0003005 | NDEL1 | ENSPPYP00000013691 | ENSPPYP00000008952 | T0009947 isoform 1. | Nuclear distribution protein nudE-like 1; Required for organization of the cellular microtubule array and microtubule anchoring at the centrosome. May regulate microtubule organization at least in part by targeting the microtubule severing protein KATNA1 to the centrosome. Also positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus ends. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the centripe [...] | 0.525 |
CR201_G0003005 | NUDC | ENSPPYP00000013691 | ENSPPYP00000001931 | T0009947 isoform 1. | Nuclear distribution C, dynein complex regulator. | 0.433 |
CR201_G0003005 | PAFAH1B1 | ENSPPYP00000013691 | ENSPPYP00000008783 | T0009947 isoform 1. | Platelet-activating factor acetylhydrolase IB subunit alpha; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. Required during brain development for the proliferation of neuronal precursors and the migration of newly formed neurons from the ven [...] | 0.946 |
DCTN2 | CR201_G0003005 | ENSPPYP00000005347 | ENSPPYP00000013691 | DCTN2 isoform 1. | T0009947 isoform 1. | 0.999 |
DCTN2 | DYNC1I1 | ENSPPYP00000005347 | ENSPPYP00000019951 | DCTN2 isoform 1. | Dynein cytoplasmic 1 intermediate chain 1. | 0.996 |
DCTN2 | DYNC1I2 | ENSPPYP00000005347 | ENSPPYP00000014432 | DCTN2 isoform 1. | Cytoplasmic dynein 1 intermediate chain 2; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and help dynein bind to dynactin 150 kDa component (By similarity). organelles along microtubules. The intermediate chains mediate the binding of dynein to dynactin via its 150 kDa component (p150-glued) DCNT1. Involved in membrane-transport, such a [...] | 0.992 |
DCTN2 | DYNLL1 | ENSPPYP00000005347 | ENSPPYP00000005735 | DCTN2 isoform 1. | Dynein light chain. | 0.922 |
DCTN2 | NDEL1 | ENSPPYP00000005347 | ENSPPYP00000008952 | DCTN2 isoform 1. | Nuclear distribution protein nudE-like 1; Required for organization of the cellular microtubule array and microtubule anchoring at the centrosome. May regulate microtubule organization at least in part by targeting the microtubule severing protein KATNA1 to the centrosome. Also positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus ends. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the centripe [...] | 0.419 |
DCTN2 | PAFAH1B1 | ENSPPYP00000005347 | ENSPPYP00000008783 | DCTN2 isoform 1. | Platelet-activating factor acetylhydrolase IB subunit alpha; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. Required during brain development for the proliferation of neuronal precursors and the migration of newly formed neurons from the ven [...] | 0.950 |
DYNC1I1 | CR201_G0003005 | ENSPPYP00000019951 | ENSPPYP00000013691 | Dynein cytoplasmic 1 intermediate chain 1. | T0009947 isoform 1. | 0.995 |
DYNC1I1 | DCTN2 | ENSPPYP00000019951 | ENSPPYP00000005347 | Dynein cytoplasmic 1 intermediate chain 1. | DCTN2 isoform 1. | 0.996 |
DYNC1I1 | DYNC1I2 | ENSPPYP00000019951 | ENSPPYP00000014432 | Dynein cytoplasmic 1 intermediate chain 1. | Cytoplasmic dynein 1 intermediate chain 2; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and help dynein bind to dynactin 150 kDa component (By similarity). organelles along microtubules. The intermediate chains mediate the binding of dynein to dynactin via its 150 kDa component (p150-glued) DCNT1. Involved in membrane-transport, such a [...] | 0.989 |
DYNC1I1 | DYNLL1 | ENSPPYP00000019951 | ENSPPYP00000005735 | Dynein cytoplasmic 1 intermediate chain 1. | Dynein light chain. | 0.990 |
DYNC1I1 | NDEL1 | ENSPPYP00000019951 | ENSPPYP00000008952 | Dynein cytoplasmic 1 intermediate chain 1. | Nuclear distribution protein nudE-like 1; Required for organization of the cellular microtubule array and microtubule anchoring at the centrosome. May regulate microtubule organization at least in part by targeting the microtubule severing protein KATNA1 to the centrosome. Also positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus ends. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the centripe [...] | 0.744 |
DYNC1I1 | NUDC | ENSPPYP00000019951 | ENSPPYP00000001931 | Dynein cytoplasmic 1 intermediate chain 1. | Nuclear distribution C, dynein complex regulator. | 0.590 |
DYNC1I1 | PAFAH1B1 | ENSPPYP00000019951 | ENSPPYP00000008783 | Dynein cytoplasmic 1 intermediate chain 1. | Platelet-activating factor acetylhydrolase IB subunit alpha; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. Required during brain development for the proliferation of neuronal precursors and the migration of newly formed neurons from the ven [...] | 0.942 |
page 1 of 4