STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITGB4Integrin beta. (1814 aa)    
Predicted Functional Partners:
ITGA6
ITGA6 isoform 6; Belongs to the integrin alpha chain family.
   
 0.999
LAMB3
LAMB3 isoform 1.
   
 0.980
PLEC
PLEC isoform 2.
  
 0.977
LAMA3
LAMA3 isoform 1.
   
 0.976
ENSPPYP00000023839
annotation not available
   
 0.971
PTK2
PTK2 isoform 11; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
 0.956
LAMC1
LAMC1 isoform 1.
   
 0.948
LAMC3
LAMC3 isoform 2.
   
 0.945
SRC
Tyrosine-protein kinase.
   
 0.938
LAMB1
LAMB1 isoform 1.
    
 0.933
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.