MBP protein (Pongo abelii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Pongo abelii

NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CNP	LRRK2	ENSPPYP00000009449	ENSPPYP00000023875	2',3'-cyclic-nucleotide 3'-phosphodiesterase; May participate in RNA metabolism in the myelinating cell, CNP is the third most abundant protein in central nervous system myelin; Belongs to the 2H phosphoesterase superfamily. CNPase family.	LRRK2 isoform 3.	0.538
CNP	MAG	ENSPPYP00000009449	ENSPPYP00000011036	2',3'-cyclic-nucleotide 3'-phosphodiesterase; May participate in RNA metabolism in the myelinating cell, CNP is the third most abundant protein in central nervous system myelin; Belongs to the 2H phosphoesterase superfamily. CNPase family.	MAG isoform 1.	0.749
CNP	MBP	ENSPPYP00000009449	ENSPPYP00000010383	2',3'-cyclic-nucleotide 3'-phosphodiesterase; May participate in RNA metabolism in the myelinating cell, CNP is the third most abundant protein in central nervous system myelin; Belongs to the 2H phosphoesterase superfamily. CNPase family.	MBP isoform 10.	0.843
CNP	PLP1	ENSPPYP00000009449	ENSPPYP00000023045	2',3'-cyclic-nucleotide 3'-phosphodiesterase; May participate in RNA metabolism in the myelinating cell, CNP is the third most abundant protein in central nervous system myelin; Belongs to the 2H phosphoesterase superfamily. CNPase family.	Myelin proteolipid protein; This is the major myelin protein from the central nervous system. It plays an important role in the formation or maintenance of the multilamellar structure of myelin (By similarity).	0.689
CTDSP1	CTDSPL	ENSPPYP00000014720	ENSPPYP00000015678	Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X1.	CTDSPL isoform 2.	0.962
CTDSP1	MBP	ENSPPYP00000014720	ENSPPYP00000010383	Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X1.	MBP isoform 10.	0.915
CTDSPL	CTDSP1	ENSPPYP00000015678	ENSPPYP00000014720	CTDSPL isoform 2.	Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X1.	0.962
CTDSPL	MBP	ENSPPYP00000015678	ENSPPYP00000010383	CTDSPL isoform 2.	MBP isoform 10.	0.915
ENSPPYP00000013398	MAPK1	ENSPPYP00000013398	ENSPPYP00000023664	annotation not available	Mitogen-activated protein kinase 1 isoform X1.	0.899
ENSPPYP00000013398	MAPK14	ENSPPYP00000013398	ENSPPYP00000018500	annotation not available	Mitogen-activated protein kinase.	0.832
ENSPPYP00000013398	MAPK3	ENSPPYP00000013398	ENSPPYP00000008184	annotation not available	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.980
ENSPPYP00000013398	MBP	ENSPPYP00000013398	ENSPPYP00000010383	annotation not available	MBP isoform 10.	0.801
LRRK2	CNP	ENSPPYP00000023875	ENSPPYP00000009449	LRRK2 isoform 3.	2',3'-cyclic-nucleotide 3'-phosphodiesterase; May participate in RNA metabolism in the myelinating cell, CNP is the third most abundant protein in central nervous system myelin; Belongs to the 2H phosphoesterase superfamily. CNPase family.	0.538
LRRK2	MBP	ENSPPYP00000023875	ENSPPYP00000010383	LRRK2 isoform 3.	MBP isoform 10.	0.921
MAG	CNP	ENSPPYP00000011036	ENSPPYP00000009449	MAG isoform 1.	2',3'-cyclic-nucleotide 3'-phosphodiesterase; May participate in RNA metabolism in the myelinating cell, CNP is the third most abundant protein in central nervous system myelin; Belongs to the 2H phosphoesterase superfamily. CNPase family.	0.749
MAG	MBP	ENSPPYP00000011036	ENSPPYP00000010383	MAG isoform 1.	MBP isoform 10.	0.907
MAG	PLP1	ENSPPYP00000011036	ENSPPYP00000023045	MAG isoform 1.	Myelin proteolipid protein; This is the major myelin protein from the central nervous system. It plays an important role in the formation or maintenance of the multilamellar structure of myelin (By similarity).	0.945
MAPK1	ENSPPYP00000013398	ENSPPYP00000023664	ENSPPYP00000013398	Mitogen-activated protein kinase 1 isoform X1.	annotation not available	0.899
MAPK1	MAPK14	ENSPPYP00000023664	ENSPPYP00000018500	Mitogen-activated protein kinase 1 isoform X1.	Mitogen-activated protein kinase.	0.832
MAPK1	MAPK3	ENSPPYP00000023664	ENSPPYP00000008184	Mitogen-activated protein kinase 1 isoform X1.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.980