IQCN protein (Pongo abelii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

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[Homology]

Score

IQCN

KIAA1683 isoform 4. (1182 aa)

Predicted Functional Partners:

FANCM

0.536

POLD2

0.536

POLD1

0.522

C2AH2orf81

0.515

MUS81

0.505

DDX20

0.454

LOC100444465

0.438

POLD4

0.432

SMN1

0.432

ENSPPYP00000021497

0.432

Your Current Organism:

Pongo abelii

NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C2AH2orf81	IQCN	ENSPPYP00000013689	ENSPPYP00000010907	C2orf81 isoform 4.	KIAA1683 isoform 4.	0.515
DDX20	ENSPPYP00000021497	ENSPPYP00000001195	ENSPPYP00000021497	DEAD-box helicase 20.	annotation not available	0.962
DDX20	IQCN	ENSPPYP00000001195	ENSPPYP00000010907	DEAD-box helicase 20.	KIAA1683 isoform 4.	0.454
DDX20	SMN1	ENSPPYP00000001195	ENSPPYP00000017360	DEAD-box helicase 20.	Survival motor neuron protein; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs. Most spliceosomal snRNPs contain a common set of Sm proteins SNRPB, SNRPD1, SNRPD2, SNRPD3, SNRPE, SNRPF and SNRPG that assemble in a heptameric protein ring on the Sm site of the small nuclear RNA to form the core snRNP. In the cytosol, the Sm proteins SNRPD1, SNRPD2, SNRPE, SNRPF and SNRPG are trapped in an inactive 6S pICln-Sm complex by the ch [...]	0.996
ENSPPYP00000021497	DDX20	ENSPPYP00000021497	ENSPPYP00000001195	annotation not available	DEAD-box helicase 20.	0.962
ENSPPYP00000021497	IQCN	ENSPPYP00000021497	ENSPPYP00000010907	annotation not available	KIAA1683 isoform 4.	0.432
FANCM	IQCN	ENSPPYP00000006571	ENSPPYP00000010907	FANCM isoform 2.	KIAA1683 isoform 4.	0.536
FANCM	MUS81	ENSPPYP00000006571	ENSPPYP00000003524	FANCM isoform 2.	MUS81 isoform 3.	0.992
FANCM	POLD1	ENSPPYP00000006571	ENSPPYP00000011511	FANCM isoform 2.	DNA polymerase delta catalytic subunit.	0.750
IQCN	C2AH2orf81	ENSPPYP00000010907	ENSPPYP00000013689	KIAA1683 isoform 4.	C2orf81 isoform 4.	0.515
IQCN	DDX20	ENSPPYP00000010907	ENSPPYP00000001195	KIAA1683 isoform 4.	DEAD-box helicase 20.	0.454
IQCN	ENSPPYP00000021497	ENSPPYP00000010907	ENSPPYP00000021497	KIAA1683 isoform 4.	annotation not available	0.432
IQCN	FANCM	ENSPPYP00000010907	ENSPPYP00000006571	KIAA1683 isoform 4.	FANCM isoform 2.	0.536
IQCN	LOC100444465	ENSPPYP00000010907	ENSPPYP00000022727	KIAA1683 isoform 4.	SSX7 isoform 1.	0.438
IQCN	MUS81	ENSPPYP00000010907	ENSPPYP00000003524	KIAA1683 isoform 4.	MUS81 isoform 3.	0.505
IQCN	POLD1	ENSPPYP00000010907	ENSPPYP00000011511	KIAA1683 isoform 4.	DNA polymerase delta catalytic subunit.	0.522
IQCN	POLD2	ENSPPYP00000010907	ENSPPYP00000019723	KIAA1683 isoform 4.	DNA polymerase delta 2, accessory subunit.	0.536
IQCN	POLD4	ENSPPYP00000010907	ENSPPYP00000003474	KIAA1683 isoform 4.	POLD4 isoform 5.	0.432
IQCN	SMN1	ENSPPYP00000010907	ENSPPYP00000017360	KIAA1683 isoform 4.	Survival motor neuron protein; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs. Most spliceosomal snRNPs contain a common set of Sm proteins SNRPB, SNRPD1, SNRPD2, SNRPD3, SNRPE, SNRPF and SNRPG that assemble in a heptameric protein ring on the Sm site of the small nuclear RNA to form the core snRNP. In the cytosol, the Sm proteins SNRPD1, SNRPD2, SNRPE, SNRPF and SNRPG are trapped in an inactive 6S pICln-Sm complex by the ch [...]	0.432
LOC100444465	IQCN	ENSPPYP00000022727	ENSPPYP00000010907	SSX7 isoform 1.	KIAA1683 isoform 4.	0.438