STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA25Spermatogenesis associated 25. (227 aa)    
Predicted Functional Partners:
SPATA3
SPATA3 isoform 1.
  
   
 0.545
DEFB128
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
  
     0.498
TMCO2
TMCO2 isoform 1.
  
     0.490
NEURL2
NEURL2 isoform 1.
   
  
 0.472
ZSWIM1
Zinc finger SWIM-type containing 1.
      
 0.456
WFDC10B
WAP four-disulfide core domain 10B.
      
 0.426
ERICH4
ERICH4 isoform 1.
  
     0.422
PHIP
PHIP isoform 1.
    
 
 0.414
TAF13
Transcription initiation factor TFIID subunit 13; Component of the DNA-binding general RNA polymerase II transcription factor IID complex (TFIID). TFIID plays a critical role in the regulation of gene transcription in eukaryotic cells (By similarity); Belongs to the TAF13 family.
    
   0.412
TAF3
TAF3 isoform 1.
    
   0.412
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.