STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMARCB1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family. (395 aa)    
Predicted Functional Partners:
SMARCC2
SMARCC2 isoform 7.
   
 0.999
SMARCA4
SMARCA4 isoform 2.
   
 0.999
SMARCC1
SMARCC1 isoform 1.
   
 0.999
ARID1A
ARID1A isoform 1.
    
 0.998
SMARCA2
SMARCA2 isoform 10.
   
 0.998
SMARCD1
SMARCD1 isoform 1.
   
 0.997
ACTL6A
ACTL6A isoform 2; Belongs to the actin family.
   
 0.997
PBRM1
PBRM1 isoform 3.
    
 0.996
ARID1B
ARID1B isoform 2.
    
 0.995
ARID2
AT-rich interaction domain 2.
    
 0.994
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.