STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFEMP1EGF containing fibulin extracellular matrix protein 1. (493 aa)    
Predicted Functional Partners:
TIMP3
TIMP metallopeptidase inhibitor 3.
   
  
 0.755
EGFR
Receptor protein-tyrosine kinase.
   
 0.716
CR201_G0032167
FBLN2 isoform 1.
 
 
 0.710
MFAP4
Microfibril associated protein 4.
   
 0.628
ECM1
Extracellular matrix protein 1.
    
 
 0.563
LUM
LUM isoform 1.
   
 0.528
CILP
CILP isoform 1.
      
 0.497
CR201_G0054877
MSLN isoform 7.
   
  
 0.473
MMP7
MMP7 isoform 1.
    
 0.472
CR201_G0023224
MYO7A isoform 2.
      
 0.451
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.