STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCAGrancalcin; Calcium-binding protein that may play a role in the adhesion of neutrophils to fibronectin. May play a role in the formation of focal adhesions (By similarity). (218 aa)    
Predicted Functional Partners:
KCNH7
KCNH7 isoform 2.
      
 0.682
LCP1
Lymphocyte cytosolic protein 1.
    
 
 0.608
CAST
CAST isoform 3.
   
 0.512
FECH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
    0.497
IFIH1
IFIH1 isoform 1.
   
  
 0.484
CAPN9
CAPN9 isoform 2; Belongs to the peptidase C2 family.
   
0.415
CAPN2
CAPN2 isoform 2; Belongs to the peptidase C2 family.
   
0.415
CAPN8
CAPN8 isoform 1; Belongs to the peptidase C2 family.
   
0.415
CAPN1
Calpain-1 catalytic subunit; Calcium-regulated non-lysosomal thiol-protease which catalyzes limited proteolysis of substrates involved in cytoskeletal remodeling and signal transduction.
   
0.415
CAPN5
CAPN5 isoform 1; Belongs to the peptidase C2 family.
   
 0.415
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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