Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C2CD6C2CD6 isoform 3. (623 aa)    
Predicted Functional Partners:
EFHC1
EFHC1 isoform 14.
   
  
 0.994
RSPH9
RSPH9 isoform 2.
   
    0.994
CATSPERE
CATSPERE isoform 3.
      
 0.649
EFHC2
EF-hand domain containing 2.
   
  
 0.627
EFCAB9
EFCAB9 isoform 1.
      
 0.585
TMEM237
TMEM237 isoform 6.
      
 0.567
FANCM
FANCM isoform 2.
      
 0.533
EFHB
EFHB isoform 1.
      
 0.523
EFCAB2
EF-hand calcium binding domain 2.
      
 0.514
CATSPER3
Cation channel sperm associated 3.
      
 0.500
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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