Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC54Coiled-coil domain containing 54. (328 aa)    
Predicted Functional Partners:
ADAM2
ADAM2 isoform 1.
   
  
 0.653
SPACA6
SPACA6 isoform 8.
      
 0.645
CR201_G0018955
TCHHL1 isoform 1.
  
   
 0.643
SPRR4
SPRR4 isoform 1.
      
 0.634
SLC6A5
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.571
TECTB
TECTB isoform 1.
   
  
 0.552
MGAM
MGAM isoform 2.
   
  
 0.547
TSKS
TSKS isoform 2.
      
 0.544
TCN1
Transcobalamin 1.
   
  
 0.539
TCTE1
TCTE1 isoform 1.
      
 0.529
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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