STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC54Coiled-coil domain containing 54. (328 aa)    
Predicted Functional Partners:
C11orf71
C11orf71 isoform 2.
  
   
 0.533
ADAM29
ADAM29 isoform 12.
   
  
 0.518
ADAM15
ADAM15 isoform 14.
      
 0.497
ADAM2
ADAM2 isoform 1.
   
  
 0.464
C22orf23
Chromosome 22 open reading frame 23.
      
 0.450
C6orf15
C6orf15 isoform 1.
  
     0.434
PLAC1
Placenta enriched 1.
  
     0.425
TMCO2
TMCO2 isoform 1.
   
  
 0.420
TEX33
Testis expressed 33.
  
   
 0.404
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.