STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDE6BPhosphodiesterase. (713 aa)    
Predicted Functional Partners:
PDE6G
PDE6G isoform 1.
   
 0.981
PDE6A
Phosphodiesterase.
  
  
0.959
PRPH2
PRPH2 isoform 1.
   
  
 0.812
CNGB1
CNGB1 isoform 1.
   
 0.804
CNGA1
CNGA1 isoform 1.
   
 0.768
RHO
Rhodopsin.
   
  
 0.752
GNAT2
G protein subunit alpha transducin 2.
   
 0.746
SLC24A1
SLC24A1 isoform 2; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
  
 0.740
CABP4
Calcium binding protein 4.
   
  
 0.702
RD3
RD3 isoform 1.
    
 
 0.698
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.