Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LDB2LDB2 isoform 1. (360 aa)    
Predicted Functional Partners:
LMO2
LMO2 isoform 1.
    
 0.950
TAL1
TAL1 isoform 1.
    
 0.925
LMO4
LIM domain only 4.
   
 0.867
ISL1
ISL1 isoform 1.
    
 0.803
LMO1
LMO1 isoform 3.
    
 0.802
LMO3
LIM domain only protein 3.
    
 0.802
ISL2
ISL LIM homeobox 2.
    
 0.796
LHX2
LHX2 isoform 2.
    
 0.791
LMX1B
LMX1B isoform 4.
    
 0.783
GATA3
GATA binding protein 3.
    
 0.760
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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