STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDB2LDB2 isoform 1. (360 aa)    
Predicted Functional Partners:
LMO2
LMO2 isoform 1.
    
 0.972
TAL1
TAL1 isoform 1.
    
 0.962
GATA1
GATA1 isoform 1.
    
 0.909
TCF3
TCF3 isoform 5.
   
 0.908
GATA2
GATA2 isoform 1.
    
 0.897
LYL1
LYL1 basic helix-loop-helix family member.
    
 0.866
LMO1
LMO1 isoform 3.
    
 0.862
LMO3
LIM domain only protein 3.
    
 0.862
ISL1
ISL1 isoform 1.
    
 0.856
LHX2
LHX2 isoform 2.
    
 0.852
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.