STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMIM20SMIM20 isoform 1. (106 aa)    
Predicted Functional Partners:
MYL1
MYL1 isoform 2.
   
 0.856
TNNI2
Troponin I2, fast skeletal type.
   
 0.821
TNNI1
TNNI1 isoform 1.
   
 0.821
TNNI3
TNNI3 isoform 3.
   
 0.821
TNNC2
TNNC2 isoform 2.
   
 0.780
DNAAF3
T0195332 isoform 1.
   
 0.731
TNNC1
Troponin C1, slow skeletal and cardiac type.
   
 0.712
TPM3
TPM3 isoform 6; Belongs to the tropomyosin family.
   
 0.659
TPM1
TPM1 isoform 2; Belongs to the tropomyosin family.
   
 0.659
CR201_G0037119
TPM1 isoform 25.
   
 0.659
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.