STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA18Spermatogenesis associated 18. (540 aa)    
Predicted Functional Partners:
SPATA45
Spermatogenesis associated 45.
      
 0.689
ZNF558
Zinc finger protein 558.
      
 0.686
GHR
Growth hormone receptor.
      
 0.624
CYP2A13
CYP2A13 isoform 1; Belongs to the cytochrome P450 family.
      
 0.617
SGCB
Beta-sarcoglycan; Component of the sarcoglycan complex, a subcomplex of the dystrophin-glycoprotein complex which forms a link between the F-actin cytoskeleton and the extracellular matrix.
      
 0.588
BNIP3L
BCL2 interacting protein 3 like.
      
 0.561
RSPH14
RSPH14 isoform 2.
   
  
 0.466
CR201_G0012693
DMBT1 isoform 1.
   
  
 0.465
SUOX
SUOX isoform 1.
      
 0.440
CFAP161
Cilia and flagella associated protein 161.
   
  
 0.419
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.