STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTULINOTU deubiquitinase with linear linkage specificity. (352 aa)    
Predicted Functional Partners:
RNF31
T0114761 isoform 1.
    
 0.989
UBC
UBC isoform 2.
    
 0.968
RBCK1
RBCK1 isoform 5.
    
 0.965
SNX27
SNX27 isoform 2.
    
 
 0.958
SHARPIN
SHARPIN isoform 2.
    
 0.925
TNF
Tumor necrosis factor ligand 1F; Belongs to the tumor necrosis factor family.
    
 
 0.835
UBA52
UBA52 isoform 10.
    
 0.793
CR201_G0053435
UBB isoform 1.
    
 0.687
ENSPPYP00000009931
annotation not available
    
 0.637
OTUD7B
OTU deubiquitinase 7B.
    
 
 0.629
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.