Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSPPYP00000020452 | RAD1 | ENSPPYP00000020452 | ENSPPYP00000017189 | annotation not available | Cell cycle checkpoint protein RAD1; Component of the 9-1-1 cell-cycle checkpoint response complex that plays a major role in DNA repair. The 9-1-1 complex is recruited to DNA lesion upon damage by the RAD17-replication factor C (RFC) clamp loader complex. Acts then as a sliding clamp platform on DNA for several proteins involved in long-patch base excision repair (LP-BER). The 9-1-1 complex stimulates DNA polymerase beta (POLB) activity by increasing its affinity for the 3'-OH end of the primer-template and stabilizes POLB to those sites where LP-BER proceeds; endonuclease FEN1 cleavag [...] | 0.981 |
ENSPPYP00000020452 | RAD17 | ENSPPYP00000020452 | ENSPPYP00000017352 | annotation not available | Cell cycle checkpoint protein RAD17; Essential for sustained cell growth, maintenance of chromosomal stability, and ATR-dependent checkpoint activation upon DNA damage. Has a weak ATPase activity required for binding to chromatin. Participates in the recruitment of the RAD1-RAD9-HUS1 complex and RHNO1 onto chromatin, and in CHEK1 activation. May also serve as a sensor of DNA replication progression, and may be involved in homologous recombination (By similarity); Belongs to the rad17/RAD24 family. | 0.979 |
ENSPPYP00000020452 | RAD9A | ENSPPYP00000020452 | ENSPPYP00000003473 | annotation not available | Cell cycle checkpoint control protein; Belongs to the rad9 family. | 0.975 |
ENSPPYP00000020452 | RAD9B | ENSPPYP00000020452 | ENSPPYP00000005650 | annotation not available | Cell cycle checkpoint control protein; Belongs to the rad9 family. | 0.856 |
ENSPPYP00000020452 | RFC2 | ENSPPYP00000020452 | ENSPPYP00000019603 | annotation not available | RFC2 isoform 5. | 0.962 |
ENSPPYP00000020452 | RFC3 | ENSPPYP00000020452 | ENSPPYP00000006005 | annotation not available | Replication factor C subunit 3. | 0.887 |
ENSPPYP00000020452 | RFC4 | ENSPPYP00000020452 | ENSPPYP00000016091 | annotation not available | Replication factor C subunit 4. | 0.949 |
ENSPPYP00000020452 | RFC5 | ENSPPYP00000020452 | ENSPPYP00000005709 | annotation not available | Replication factor C subunit 5. | 0.942 |
ENSPPYP00000020452 | WRN | ENSPPYP00000020452 | ENSPPYP00000020730 | annotation not available | WRN isoform 1. | 0.937 |
HUS1 | RAD1 | ENSPPYP00000023458 | ENSPPYP00000017189 | Checkpoint protein; Belongs to the HUS1 family. | Cell cycle checkpoint protein RAD1; Component of the 9-1-1 cell-cycle checkpoint response complex that plays a major role in DNA repair. The 9-1-1 complex is recruited to DNA lesion upon damage by the RAD17-replication factor C (RFC) clamp loader complex. Acts then as a sliding clamp platform on DNA for several proteins involved in long-patch base excision repair (LP-BER). The 9-1-1 complex stimulates DNA polymerase beta (POLB) activity by increasing its affinity for the 3'-OH end of the primer-template and stabilizes POLB to those sites where LP-BER proceeds; endonuclease FEN1 cleavag [...] | 0.998 |
HUS1 | RAD17 | ENSPPYP00000023458 | ENSPPYP00000017352 | Checkpoint protein; Belongs to the HUS1 family. | Cell cycle checkpoint protein RAD17; Essential for sustained cell growth, maintenance of chromosomal stability, and ATR-dependent checkpoint activation upon DNA damage. Has a weak ATPase activity required for binding to chromatin. Participates in the recruitment of the RAD1-RAD9-HUS1 complex and RHNO1 onto chromatin, and in CHEK1 activation. May also serve as a sensor of DNA replication progression, and may be involved in homologous recombination (By similarity); Belongs to the rad17/RAD24 family. | 0.979 |
HUS1 | RAD9A | ENSPPYP00000023458 | ENSPPYP00000003473 | Checkpoint protein; Belongs to the HUS1 family. | Cell cycle checkpoint control protein; Belongs to the rad9 family. | 0.994 |
HUS1 | RAD9B | ENSPPYP00000023458 | ENSPPYP00000005650 | Checkpoint protein; Belongs to the HUS1 family. | Cell cycle checkpoint control protein; Belongs to the rad9 family. | 0.904 |
HUS1 | RFC2 | ENSPPYP00000023458 | ENSPPYP00000019603 | Checkpoint protein; Belongs to the HUS1 family. | RFC2 isoform 5. | 0.962 |
HUS1 | RFC3 | ENSPPYP00000023458 | ENSPPYP00000006005 | Checkpoint protein; Belongs to the HUS1 family. | Replication factor C subunit 3. | 0.887 |
HUS1 | RFC4 | ENSPPYP00000023458 | ENSPPYP00000016091 | Checkpoint protein; Belongs to the HUS1 family. | Replication factor C subunit 4. | 0.949 |
HUS1 | RFC5 | ENSPPYP00000023458 | ENSPPYP00000005709 | Checkpoint protein; Belongs to the HUS1 family. | Replication factor C subunit 5. | 0.942 |
HUS1 | WRN | ENSPPYP00000023458 | ENSPPYP00000020730 | Checkpoint protein; Belongs to the HUS1 family. | WRN isoform 1. | 0.937 |
RAD1 | ENSPPYP00000020452 | ENSPPYP00000017189 | ENSPPYP00000020452 | Cell cycle checkpoint protein RAD1; Component of the 9-1-1 cell-cycle checkpoint response complex that plays a major role in DNA repair. The 9-1-1 complex is recruited to DNA lesion upon damage by the RAD17-replication factor C (RFC) clamp loader complex. Acts then as a sliding clamp platform on DNA for several proteins involved in long-patch base excision repair (LP-BER). The 9-1-1 complex stimulates DNA polymerase beta (POLB) activity by increasing its affinity for the 3'-OH end of the primer-template and stabilizes POLB to those sites where LP-BER proceeds; endonuclease FEN1 cleavag [...] | annotation not available | 0.981 |
RAD1 | HUS1 | ENSPPYP00000017189 | ENSPPYP00000023458 | Cell cycle checkpoint protein RAD1; Component of the 9-1-1 cell-cycle checkpoint response complex that plays a major role in DNA repair. The 9-1-1 complex is recruited to DNA lesion upon damage by the RAD17-replication factor C (RFC) clamp loader complex. Acts then as a sliding clamp platform on DNA for several proteins involved in long-patch base excision repair (LP-BER). The 9-1-1 complex stimulates DNA polymerase beta (POLB) activity by increasing its affinity for the 3'-OH end of the primer-template and stabilizes POLB to those sites where LP-BER proceeds; endonuclease FEN1 cleavag [...] | Checkpoint protein; Belongs to the HUS1 family. | 0.998 |
page 1 of 6