STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCOF1TCOF1 isoform 1. (1489 aa)    
Predicted Functional Partners:
PAX3
PAX3 isoform 1.
    
 
 0.645
COL7A1
COL7A1 isoform 1.
    
 0.533
MSRB3
Methionine-R-sulfoxide reductase B3; Catalyzes the reduction of free and protein-bound methionine sulfoxide to methionine.
      
 0.530
COL4A5
COL4A5 isoform 2.
    
 0.488
BAZ1B
BAZ1B isoform 1.
    
 
 0.465
NES
NES isoform 1; Belongs to the intermediate filament family.
  
 
  0.456
DISC1
DISC1 scaffold protein.
    
 0.450
CR201_G0016196
HLA-DQB1 isoform 5.
    
 0.431
CR201_G0051049
KLRC4 isoform 1.
  
 
  0.409
SPATA3
SPATA3 isoform 1.
  
 
   0.405
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.