Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ERVFRD-1ERVFRD-1 isoform 1. (538 aa)    
Predicted Functional Partners:
ZNF8
ZNF8 isoform 1.
    
 0.757
ZNF273
ZNF273 isoform 2.
    
 0.681
TEDDM1
TEDDM1 isoform 1.
   
    0.628
ZNF92
ZNF92 isoform 1.
    
 0.580
SAMD15
SAMD15 isoform 1.
   
    0.546
LIN52
Protein lin-52 homolog.
    
 0.538
KANK4
KANK4 isoform 1.
    
 
 0.537
EDNRB
Endothelin receptor type B; Belongs to the G-protein coupled receptor 1 family.
     
 0.534
FANCM
FANCM isoform 2.
    
 0.529
CD4
CD4 isoform 2.
    
 0.523
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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