STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEDD9NEDD9 isoform 1. (834 aa)    
Predicted Functional Partners:
ITSN2
ITSN2 isoform 3.
     
 0.915
MICAL1
MICAL1 isoform 2.
   
 
 0.912
BCAR3
BCAR3 isoform 5.
    
 0.894
CRKL
CRKL isoform 1.
    
 0.890
PTK2
PTK2 isoform 11; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.853
SMAD3
Mothers against decapentaplegic homolog.
    
 
 0.852
AURKA
AURKA isoform 10; Belongs to the protein kinase superfamily.
   
 0.841
NIN
NIN isoform 1.
    
 
 0.829
SRC
Tyrosine-protein kinase.
   
 0.829
PTPRG
PTPRG isoform 1.
   
 
 0.802
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.