STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM39Tripartite motif-containing protein 39. (488 aa)    
Predicted Functional Partners:
BBOX1
Gamma-butyrobetaine dioxygenase; Catalyzes the formation of L-carnitine from gamma- butyrobetaine; Belongs to the gamma-BBH/TMLD family.
      
 0.568
PNRC1
PNRC1 isoform 1.
   
  
 0.548
PPP1R11
PPP1R11 isoform 1.
      
 0.531
MOAP1
MOAP1 isoform 1.
   
 
 0.500
PPP1R26
Protein phosphatase 1 regulatory subunit 26.
   
 
 0.489
CACTIN
CACTIN isoform 1.
    
 
 0.471
POU5F1
POU domain protein.
    
 0.471
OR52H1
Olfactory receptor.
      
 0.470
TRIM9
TRIM9 isoform 1.
   
 
 0.465
PRKG1
PRKG1 isoform 4; Belongs to the protein kinase superfamily.
    
 
 0.464
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.