STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFTumor necrosis factor ligand 1F; Belongs to the tumor necrosis factor family. (233 aa)    
Predicted Functional Partners:
TNFRSF1B
TNFRSF1B isoform 2.
   
 0.999
TNFRSF1A
TNFRSF1A isoform 2.
    
 0.999
CR201_G0015089
TRADD isoform 2.
    
 0.998
CHUK
CHUK isoform 1.
   
 0.997
RIPK1
Receptor interacting serine/threonine kinase 1.
   
 0.997
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
   
 0.997
TRAF2
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.997
IKBKG
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
 0.997
BIRC2
Baculoviral IAP repeat containing 2.
   
 0.996
CASP8
CASP8 isoform 1; Belongs to the peptidase C14A family.
   
 
 0.996
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.