STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBX2PBX2 isoform 1. (388 aa)    
Predicted Functional Partners:
PKNOX1
PKNOX1 isoform 1.
    
0.964
MEIS2
MEIS2 isoform 15.
   
0.936
MAB21L1
MAB21L1 isoform 1.
    
 
 0.862
HOXB5
HOXB5 isoform 1.
    
 0.737
MEIS1
MEIS1 isoform 1.
   
0.723
HOXB1
HOXB1 isoform 1.
    
 0.700
HOXC9
Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.
    
 
 0.685
HOXB7
HOXB7 isoform 2.
    
 0.679
LRRC17
LRRC17 isoform 2.
      
 0.675
LMX1B
LMX1B isoform 4.
    
 
 0.667
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.