Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CR201_G0015086 | RUNX2 | ENSPPYP00000008404 | ENSPPYP00000018641 | CBFB isoform 2. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.998 |
CR201_G0015086 | SMURF1 | ENSPPYP00000008404 | ENSPPYP00000019458 | CBFB isoform 2. | E3 ubiquitin-protein ligase. | 0.628 |
CR201_G0015086 | YAP1 | ENSPPYP00000008404 | ENSPPYP00000004354 | CBFB isoform 2. | YAP1 isoform 2. | 0.506 |
DLX5 | MSX2 | ENSPPYP00000019945 | ENSPPYP00000017974 | Distal-less homeobox 5. | MSX2 isoform 1. | 0.682 |
DLX5 | RUNX2 | ENSPPYP00000019945 | ENSPPYP00000018641 | Distal-less homeobox 5. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.908 |
DLX5 | SOX9 | ENSPPYP00000019945 | ENSPPYP00000009638 | Distal-less homeobox 5. | SRY-box transcription factor 9. | 0.405 |
FOS | PRKACB | ENSPPYP00000006826 | ENSPPYP00000001400 | Fos proto-oncogene, AP-1 transcription factor subunit. | PRKACB isoform 9; Belongs to the protein kinase superfamily. | 0.943 |
FOS | PRKACG | ENSPPYP00000006826 | ENSPPYP00000021585 | Fos proto-oncogene, AP-1 transcription factor subunit. | Protein kinase cAMP-activated catalytic subunit gamma; Belongs to the protein kinase superfamily. | 0.943 |
FOS | RUNX2 | ENSPPYP00000006826 | ENSPPYP00000018641 | Fos proto-oncogene, AP-1 transcription factor subunit. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.964 |
FOS | YAP1 | ENSPPYP00000006826 | ENSPPYP00000004354 | Fos proto-oncogene, AP-1 transcription factor subunit. | YAP1 isoform 2. | 0.563 |
MSX2 | DLX5 | ENSPPYP00000017974 | ENSPPYP00000019945 | MSX2 isoform 1. | Distal-less homeobox 5. | 0.682 |
MSX2 | RUNX2 | ENSPPYP00000017974 | ENSPPYP00000018641 | MSX2 isoform 1. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.930 |
MSX2 | SOX9 | ENSPPYP00000017974 | ENSPPYP00000009638 | MSX2 isoform 1. | SRY-box transcription factor 9. | 0.456 |
MYSM1 | RUNX2 | ENSPPYP00000001512 | ENSPPYP00000018641 | MYSM1 isoform 1. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.882 |
PRKACB | FOS | ENSPPYP00000001400 | ENSPPYP00000006826 | PRKACB isoform 9; Belongs to the protein kinase superfamily. | Fos proto-oncogene, AP-1 transcription factor subunit. | 0.943 |
PRKACB | PRKACG | ENSPPYP00000001400 | ENSPPYP00000021585 | PRKACB isoform 9; Belongs to the protein kinase superfamily. | Protein kinase cAMP-activated catalytic subunit gamma; Belongs to the protein kinase superfamily. | 0.958 |
PRKACB | RUNX2 | ENSPPYP00000001400 | ENSPPYP00000018641 | PRKACB isoform 9; Belongs to the protein kinase superfamily. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.923 |
PRKACB | SOX9 | ENSPPYP00000001400 | ENSPPYP00000009638 | PRKACB isoform 9; Belongs to the protein kinase superfamily. | SRY-box transcription factor 9. | 0.916 |
PRKACG | FOS | ENSPPYP00000021585 | ENSPPYP00000006826 | Protein kinase cAMP-activated catalytic subunit gamma; Belongs to the protein kinase superfamily. | Fos proto-oncogene, AP-1 transcription factor subunit. | 0.943 |
PRKACG | PRKACB | ENSPPYP00000021585 | ENSPPYP00000001400 | Protein kinase cAMP-activated catalytic subunit gamma; Belongs to the protein kinase superfamily. | PRKACB isoform 9; Belongs to the protein kinase superfamily. | 0.958 |
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