Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRAPPC3LTrafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (181 aa)    
Predicted Functional Partners:
TRAPPC5
Trafficking protein particle complex subunit 5.
   
 0.982
TRAPPC4
Trafficking protein particle complex subunit 4; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
   
 0.978
TRAPPC6B
Trafficking protein particle complex 6B.
   
 0.975
TRAPPC1
Trafficking protein particle complex subunit 1.
   
 0.971
TRAPPC10
TRAPPC10 isoform 2.
    
 0.963
TRAPPC12
Trafficking protein particle complex 12.
    
 0.963
TRAPPC6A
TRAPPC6A isoform 2.
   
 0.962
TRAPPC2L
Trafficking protein particle complex subunit 2-like protein; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
   
 0.961
TRAPPC9
TRAPPC9 isoform 1.
    
 0.956
TRAPPC11
TRAPPC11 isoform 2.
    
 0.952
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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