STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL11A2COL11A2 isoform 2. (1705 aa)    
Predicted Functional Partners:
COL5A2
Collagen type V alpha 2 chain.
  
0.686
COL2A1
Collagen type II alpha 1 chain.
  
0.632
PCOLCE
PCOLCE isoform 1.
   
 0.613
TSBP1
C6orf10 isoform 1.
      
 0.588
HLA-DQB2
Major histocompatibility complex, class II, DQ beta 2.
   
 0.585
HLA-DOB
HLA class II histocompatibility antigen, DO beta chain.
   
 0.548
ID1
Inhibitor of DNA binding 1, HLH protein.
      
 0.541
PSMB8
Proteasome subunit beta.
     
 0.537
HLA-DRB5
Ig-like domain-containing protein.
   
 0.510
BTNL2
BTNL2 isoform 4.
    
 
 0.506
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.