close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRBV5-3T cell receptor beta variable 5-3 (non-functional). (114 aa)    
Predicted Functional Partners:
TRAV12-1
TRAV12-1 isoform 1.
  
   
 0.687
TRAV40
T cell receptor alpha variable 40.
  
   
 0.659
TRAV9-1
T cell receptor alpha variable 9-1.
  
 
  0.515
TRAV16
TRAV16 isoform 1.
  
 
  0.445
CR201_G0032822
TRAV36DV7 isoform 1.
  
 
  0.439
TRAV1-2
TRAV1-2 isoform 1.
    
 0.437
CR201_G0032841
TRAV21 isoform 1.
  
 
  0.425
TRAV17
T cell receptor alpha variable 17.
  
 
  0.412
ENSPPYP00000006400
annotation not available
  
     0.400
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.