STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRBV12-5T cell receptor beta variable 12-5. (116 aa)    
Predicted Functional Partners:
TRAV4
T cell receptor alpha variable 4.
  
 
 0.523
TRBV30
T cell receptor beta variable 30 (gene/pseudogene).
  
   
 0.492
CR201_G0052849
IGHM isoform 1.
  
 
  0.482
ENSPPYP00000007056
annotation not available
  
 
  0.437
CR201_G0052853
IGHG1 isoform 1.
  
 
  0.421
CR201_G0032834
TRAV26-1 isoform 1.
  
 
 0.407
CR201_G0053595
IGKV4-1 isoform 1.
  
 
  0.405
ENSPPYP00000007057
annotation not available
  
 
  0.403
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.