STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEFA6Defensin alpha 6. (100 aa)    
Predicted Functional Partners:
CR201_G0035435
DEFA5 isoform 1.
   
 
0.999
LOC100435661
DEFB103B isoform 1.
     
 0.934
DEFA4
Neutrophil defensin 4.
     
0.929
LOC100436028
DEFB4A isoform 1.
     
 0.929
LOC112131868
DEFA1 isoform 1.
   
 
0.925
ENSPPYP00000021325
Neutrophil defensin 1-like.
     
 0.909
LSR
Lipolysis stimulated lipoprotein receptor.
      
 0.863
REG3A
Regenerating family member 3 alpha.
   
 
 0.749
DEFB1
DEFB1 isoform 1.
     
 0.704
ZFPM1
ZFPM1 isoform 1.
    
   0.499
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.