STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCM1PCM1 isoform 1. (2042 aa)    
Predicted Functional Partners:
BBS4
BBS4 isoform 3.
   
 
 0.955
PLK1
Serine/threonine-protein kinase PLK.
    
 0.940
CR201_G0021599
CEP131 isoform 2.
    
 0.916
PCNT
PCNT isoform 1.
   
 0.895
CEP72
CEP72 isoform 1.
    
 
 0.839
CEP290
CEP290 isoform 4.
   
 
 0.837
OFD1
OFD1 isoform 3.
   
 
 0.796
MIB1
MIB1 isoform 1.
    
 0.766
NIN
NIN isoform 1.
    
 
 0.701
RAB3IP
T0046992 isoform 1.
     
 0.680
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.