STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF20L1PHF20L1 isoform 5. (897 aa)    
Predicted Functional Partners:
FANCM
FANCM isoform 2.
   
 0.780
GATAD2B
GATAD2B isoform 2.
    
 
 0.538
GATAD2A
GATAD2A isoform 1.
    
 
 0.489
CENPT
CENPT isoform 2.
    
 0.474
LIN9
LIN9 isoform 2.
    
 0.466
ZNF280D
ZNF280D isoform 3.
   
 0.464
BCL11A
BAF chromatin remodeling complex subunit BCL11A.
    
  0.449
KANSL1
KAT8 regulatory NSL complex subunit 1.
   
  0.443
MEIOB
MEIOB isoform 4.
   
 0.436
LIN52
Protein lin-52 homolog.
    
 0.421
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.