NCBP1 protein (Pongo abelii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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Assay-based Predictions

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co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

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Your Current Organism:

Pongo abelii

NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALYREF	NCBP1	ENSPPYP00000009820	ENSPPYP00000021769	Aly/REF export factor.	Nuclear cap binding protein subunit 1.	0.983
ALYREF	NCBP2	ENSPPYP00000009820	ENSPPYP00000016158	Aly/REF export factor.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.886
ALYREF	NCBP2L	ENSPPYP00000009820	ENSPPYP00000023075	Aly/REF export factor.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.860
ALYREF	PABPN1	ENSPPYP00000009820	ENSPPYP00000006440	Aly/REF export factor.	poly(A) binding protein nuclear 1.	0.771
ALYREF	PHAX	ENSPPYP00000009820	ENSPPYP00000017588	Aly/REF export factor.	Phosphorylated adaptor for RNA export.	0.444
ALYREF	SLBP	ENSPPYP00000009820	ENSPPYP00000016236	Aly/REF export factor.	Stem-loop binding protein.	0.931
ALYREF	SRRT	ENSPPYP00000009820	ENSPPYP00000019542	Aly/REF export factor.	Serrate RNA effector molecule homolog; Acts as a mediator between the cap-binding complex (CBC) and the primary microRNAs (miRNAs) processing machinery during cell proliferation. Contributes to the stability and delivery of capped primary miRNA transcripts to the primary miRNA processing complex containing DGCR8 and DROSHA, thereby playing a role in RNA-mediated gene silencing (RNAi) by miRNAs. Binds capped RNAs (m7GpppG-capped RNA); however interaction is probably mediated via its interaction with NCBP1/CBP80 component of the CBC complex. Involved in cell cycle progression at S phase. [...]	0.983
ALYREF	UPF1	ENSPPYP00000009820	ENSPPYP00000010923	Aly/REF export factor.	UPF1 isoform 2.	0.949
NCBP1	ALYREF	ENSPPYP00000021769	ENSPPYP00000009820	Nuclear cap binding protein subunit 1.	Aly/REF export factor.	0.983
NCBP1	NCBP2	ENSPPYP00000021769	ENSPPYP00000016158	Nuclear cap binding protein subunit 1.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.999
NCBP1	NCBP2L	ENSPPYP00000021769	ENSPPYP00000023075	Nuclear cap binding protein subunit 1.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.997
NCBP1	NELFB	ENSPPYP00000021769	ENSPPYP00000022227	Nuclear cap binding protein subunit 1.	NELFB isoform 1.	0.968
NCBP1	NELFE	ENSPPYP00000021769	ENSPPYP00000018418	Nuclear cap binding protein subunit 1.	Negative elongation factor complex member E.	0.968
NCBP1	PABPN1	ENSPPYP00000021769	ENSPPYP00000006440	Nuclear cap binding protein subunit 1.	poly(A) binding protein nuclear 1.	0.972
NCBP1	PHAX	ENSPPYP00000021769	ENSPPYP00000017588	Nuclear cap binding protein subunit 1.	Phosphorylated adaptor for RNA export.	0.982
NCBP1	SLBP	ENSPPYP00000021769	ENSPPYP00000016236	Nuclear cap binding protein subunit 1.	Stem-loop binding protein.	0.973
NCBP1	SRRT	ENSPPYP00000021769	ENSPPYP00000019542	Nuclear cap binding protein subunit 1.	Serrate RNA effector molecule homolog; Acts as a mediator between the cap-binding complex (CBC) and the primary microRNAs (miRNAs) processing machinery during cell proliferation. Contributes to the stability and delivery of capped primary miRNA transcripts to the primary miRNA processing complex containing DGCR8 and DROSHA, thereby playing a role in RNA-mediated gene silencing (RNAi) by miRNAs. Binds capped RNAs (m7GpppG-capped RNA); however interaction is probably mediated via its interaction with NCBP1/CBP80 component of the CBC complex. Involved in cell cycle progression at S phase. [...]	0.984
NCBP1	UPF1	ENSPPYP00000021769	ENSPPYP00000010923	Nuclear cap binding protein subunit 1.	UPF1 isoform 2.	0.965
NCBP2	ALYREF	ENSPPYP00000016158	ENSPPYP00000009820	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Aly/REF export factor.	0.886
NCBP2	NCBP1	ENSPPYP00000016158	ENSPPYP00000021769	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Nuclear cap binding protein subunit 1.	0.999