STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHX2LHX2 isoform 2. (406 aa)    
Predicted Functional Partners:
LHX9
LHX9 isoform 1.
  
  
0.889
LDB2
LDB2 isoform 1.
    
 0.852
ROBO2
ROBO2 isoform 6.
     
 0.747
LDB1
LIM domain binding 1.
    
 0.714
CITED2
Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2.
    
 
 0.699
ASCL1
Achaete-scute family bHLH transcription factor 1.
    
 0.660
ROBO1
ROBO1 isoform 6.
     
 0.655
MSX1
MSX1 isoform 1.
   
 
 0.585
NEUROG2
NEUROG2 isoform 1.
   
  
 0.565
SIX3
SIX3 isoform 1.
   
 
 0.558
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.