STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDF1EDF1 isoform 1. (141 aa)    
Predicted Functional Partners:
FAU
Ubiquitin-like protein FUBI.
   
   0.901
CR201_G0031384
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.898
RPS3
40S ribosomal protein S3; Involved in translation as a component of the 40S small ribosomal subunit. Has endonuclease activity and plays a role in repair of damaged DNA. Cleaves phosphodiester bonds of DNAs containing altered bases with broad specificity and cleaves supercoiled DNA more efficiently than relaxed DNA. Displays high binding affinity for 7,8- dihydro-8-oxoguanine (8-oxoG), a common DNA lesion caused by reactive oxygen species (ROS). Has also been shown to bind with similar affinity to intact and damaged DNA. Stimulates the N-glycosylase activity of the base excision protei [...]
  
 
 0.894
CR201_G0016286-2
RPS10 isoform 5.
   
 
 0.894
RPS9
Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
   
   0.888
ENSPPYP00000022464
annotation not available
   
 
 0.882
CR201_G0016286
RPS10 isoform 2.
   
 
 0.881
ENSPPYP00000013403
annotation not available
   
 
 0.881
RPS20
40S ribosomal protein S20.
   
 
 0.845
CR201_G0044109-2
RACK1 isoform 22.
   
 
 0.805
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.