Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CR201_G0013169ARX isoform 4. (297 aa)    
Predicted Functional Partners:
ESX1
ESX1 isoform 1.
   
    0.927
RAX
RAX isoform 1.
   
    0.926
RAX2
Retina and anterior neural fold homeobox 2.
   
    0.926
ALX3
ALX homeobox 3.
   
  
 0.915
OTP
Orthopedia homeobox.
   
  
 0.895
DRGX
DRGX isoform 1.
   
    0.889
ALX4
ALX4 isoform 1.
   
    0.845
UNCX
UNCX isoform 1.
   
  
 0.841
SHOX
SHOX isoform 3.
   
 
 0.641
CR201_G0007803
SHOX2 isoform 5.
   
 
 0.587
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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