STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FUNDC1FUN14 domain containing 1. (155 aa)    
Predicted Functional Partners:
GABARAP
Gamma-aminobutyric acid receptor-associated protein-like 1; Ubiquitin-like modifier that increases cell-surface expression of kappa-type opioid receptor through facilitating anterograde intracellular trafficking of the receptor. Involved in formation of autophagosomal vacuoles. Whereas LC3s are involved in elongation of the phagophore membrane, the GABARAP/GATE-16 subfamily is essential for a later stage in autophagosome maturation (By similarity); Belongs to the ATG8 family.
   
 0.988
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.977
SRC
Tyrosine-protein kinase.
    
 0.969
GABARAPL1
Gamma-aminobutyric acid receptor-associated protein-like 1.
   
 0.953
LOC100445631
GABARAPL1 isoform 2.
   
 0.953
CSNK2A2
CSNK2A2 isoform 1; Belongs to the protein kinase superfamily.
   
 
 0.948
CSNK2B
Casein kinase II subunit beta.
     
 0.948
CSNK2A1
CSNK2A1 isoform 1; Belongs to the protein kinase superfamily.
   
 
 0.945
MAP1LC3B
MAP1LC3B isoform 1.
    
 0.899
MAP1LC3A
Microtubule associated protein 1 light chain 3 alpha.
    
 0.878
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.