STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBA1UBA1 isoform 1; Belongs to the ubiquitin-activating E1 family. (1056 aa)    
Predicted Functional Partners:
UBC
UBC isoform 2.
   
 0.996
UBA52
UBA52 isoform 10.
   
 0.985
CR201_G0003353
RPS27A isoform 1.
   
 0.983
ENSPPYP00000023562
annotation not available
   
 0.983
UBA6
UBA6 isoform 1.
  
 
0.978
CDC34
CDC34 isoform 1; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.975
UBE2S
UBE2S isoform 1; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.972
UBE2K
Ubiquitin conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.972
ISG15
ISG15 ubiquitin like modifier.
   
 0.969
CR201_G0053435
UBB isoform 1.
   
 0.966
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.