Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABCB9 | LAMP2 | ENSPPYP00000005784 | ENSPPYP00000023153 | ATP binding cassette subfamily B member 9. | Lysosomal associated membrane protein 2. | 0.692 |
CD63 | ENSPPYP00000005659 | ENSPPYP00000005275 | ENSPPYP00000005659 | Tetraspanin. | annotation not available | 0.491 |
CD63 | HSPA8 | ENSPPYP00000005275 | ENSPPYP00000004564 | Tetraspanin. | Heat shock cognate 71 kDa protein; Molecular chaperone implicated in a wide variety of cellular processes, including protection of the proteome from stress, folding and transport of newly synthesized polypeptides, activation of proteolysis of misfolded proteins and the formation and dissociation of protein complexes. Plays a pivotal role in the protein quality control system, ensuring the correct folding of proteins, the re-folding of misfolded proteins and controlling the targeting of proteins for subsequent degradation. This is achieved through cycles of ATP binding, ATP hydrolysis a [...] | 0.491 |
CD63 | LAMP1 | ENSPPYP00000005275 | ENSPPYP00000006297 | Tetraspanin. | LAMP1 isoform 1. | 0.650 |
CD63 | LAMP2 | ENSPPYP00000005275 | ENSPPYP00000023153 | Tetraspanin. | Lysosomal associated membrane protein 2. | 0.923 |
CD63 | RAB27A | ENSPPYP00000005275 | ENSPPYP00000007365 | Tetraspanin. | RAB27A, member RAS oncogene family. | 0.761 |
CD68 | LAMP2 | ENSPPYP00000008914 | ENSPPYP00000023153 | CD68 isoform 1. | Lysosomal associated membrane protein 2. | 0.902 |
CD68 | LAMP3 | ENSPPYP00000008914 | ENSPPYP00000016029 | CD68 isoform 1. | Lysosomal associated membrane protein 3. | 0.910 |
ENSPPYP00000005659 | CD63 | ENSPPYP00000005659 | ENSPPYP00000005275 | annotation not available | Tetraspanin. | 0.491 |
ENSPPYP00000005659 | LAMP2 | ENSPPYP00000005659 | ENSPPYP00000023153 | annotation not available | Lysosomal associated membrane protein 2. | 0.699 |
FIG4 | LAMP2 | ENSPPYP00000018937 | ENSPPYP00000023153 | FIG4 isoform 1. | Lysosomal associated membrane protein 2. | 0.632 |
FIG4 | SQSTM1 | ENSPPYP00000018937 | ENSPPYP00000018045 | FIG4 isoform 1. | Sequestosome-1; Autophagy receptor required for selective macroautophagy (aggrephagy). Functions as a bridge between polyubiquitinated cargo and autophagosomes. Interacts directly with both the cargo to become degraded and an autophagy modifier of the MAP1 LC3 family. Required both for the formation and autophagic degradation of polyubiquitin- containing bodies, called ALIS (aggresome-like induced structures) and links ALIS to the autophagic machinery. Involved in midbody ring degradation (By similarity). May regulate the activation of NFKB1 by TNF-alpha, nerve growth factor (NGF) and [...] | 0.563 |
HSPA8 | CD63 | ENSPPYP00000004564 | ENSPPYP00000005275 | Heat shock cognate 71 kDa protein; Molecular chaperone implicated in a wide variety of cellular processes, including protection of the proteome from stress, folding and transport of newly synthesized polypeptides, activation of proteolysis of misfolded proteins and the formation and dissociation of protein complexes. Plays a pivotal role in the protein quality control system, ensuring the correct folding of proteins, the re-folding of misfolded proteins and controlling the targeting of proteins for subsequent degradation. This is achieved through cycles of ATP binding, ATP hydrolysis a [...] | Tetraspanin. | 0.491 |
HSPA8 | LAMP2 | ENSPPYP00000004564 | ENSPPYP00000023153 | Heat shock cognate 71 kDa protein; Molecular chaperone implicated in a wide variety of cellular processes, including protection of the proteome from stress, folding and transport of newly synthesized polypeptides, activation of proteolysis of misfolded proteins and the formation and dissociation of protein complexes. Plays a pivotal role in the protein quality control system, ensuring the correct folding of proteins, the re-folding of misfolded proteins and controlling the targeting of proteins for subsequent degradation. This is achieved through cycles of ATP binding, ATP hydrolysis a [...] | Lysosomal associated membrane protein 2. | 0.699 |
LAMP1 | CD63 | ENSPPYP00000006297 | ENSPPYP00000005275 | LAMP1 isoform 1. | Tetraspanin. | 0.650 |
LAMP1 | LAMP2 | ENSPPYP00000006297 | ENSPPYP00000023153 | LAMP1 isoform 1. | Lysosomal associated membrane protein 2. | 0.922 |
LAMP1 | RAB27A | ENSPPYP00000006297 | ENSPPYP00000007365 | LAMP1 isoform 1. | RAB27A, member RAS oncogene family. | 0.407 |
LAMP2 | ABCB9 | ENSPPYP00000023153 | ENSPPYP00000005784 | Lysosomal associated membrane protein 2. | ATP binding cassette subfamily B member 9. | 0.692 |
LAMP2 | CD63 | ENSPPYP00000023153 | ENSPPYP00000005275 | Lysosomal associated membrane protein 2. | Tetraspanin. | 0.923 |
LAMP2 | CD68 | ENSPPYP00000023153 | ENSPPYP00000008914 | Lysosomal associated membrane protein 2. | CD68 isoform 1. | 0.902 |
page 1 of 2