TAF1C protein (Pongo abelii) - STRING interaction network

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second shell of interactors

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Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

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Score

TAF1C

TAF1C isoform 10. (844 aa)

Predicted Functional Partners:

TAF1A

0.998

TAF1D

0.997

TBP

0.996

TBPL2

0.760

POLR1E

0.721

POLR1A

0.713

RRN3

0.710

ENSPPYP00000008208

0.710

RRN3-2

0.710

TWISTNB

0.678

Your Current Organism:

Pongo abelii

NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPPYP00000008208	POLR1A	ENSPPYP00000008208	ENSPPYP00000013623	annotation not available	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.962
ENSPPYP00000008208	POLR1E	ENSPPYP00000008208	ENSPPYP00000021361	annotation not available	RNA polymerase I subunit E.	0.959
ENSPPYP00000008208	TAF1A	ENSPPYP00000008208	ENSPPYP00000000202	annotation not available	TAF1A isoform 1.	0.668
ENSPPYP00000008208	TAF1C	ENSPPYP00000008208	ENSPPYP00000024168	annotation not available	TAF1C isoform 10.	0.710
ENSPPYP00000008208	TAF1D	ENSPPYP00000008208	ENSPPYP00000004318	annotation not available	TATA box-binding protein-associated factor RNA polymerase I subunit D; Component of the transcription factor SL1/TIF-IB complex, which is involved in the assembly of the PIC (preinitiation complex) during RNA polymerase I-dependent transcription. The rate of PIC formation probably is primarily dependent on the rate of association of SL1/TIF-IB with the rDNA promoter. SL1/TIF-IB is involved in stabilization of nucleolar transcription factor 1/UBTF on rDNA. Formation of SL1/TIF-IB excludes the association of TBP with TFIID subunits (By similarity).	0.538
ENSPPYP00000008208	TBP	ENSPPYP00000008208	ENSPPYP00000019257	annotation not available	TBP isoform 3.	0.734
ENSPPYP00000008208	TBPL2	ENSPPYP00000008208	ENSPPYP00000006636	annotation not available	TATA-box binding protein like 2.	0.552
ENSPPYP00000008208	TWISTNB	ENSPPYP00000008208	ENSPPYP00000019898	annotation not available	TWISTNB isoform 1.	0.971
POLR1A	ENSPPYP00000008208	ENSPPYP00000013623	ENSPPYP00000008208	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	annotation not available	0.962
POLR1A	POLR1E	ENSPPYP00000013623	ENSPPYP00000021361	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase I subunit E.	0.999
POLR1A	RRN3	ENSPPYP00000013623	ENSPPYP00000008059	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase I-specific transcription initiation factor RRN3; Required for efficient transcription initiation by RNA polymerase I. Required for the formation of the competent preinitiation complex (PIC). Dissociates from pol I as a consequence of transcription. In vitro, cannot activate transcription in a subsequent transcription reaction (By similarity); Belongs to the RRN3 family.	0.962
POLR1A	RRN3-2	ENSPPYP00000013623	ENSPPYP00000008688	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase I-specific transcription initiation factor RRN3.	0.962
POLR1A	TAF1A	ENSPPYP00000013623	ENSPPYP00000000202	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	TAF1A isoform 1.	0.653
POLR1A	TAF1C	ENSPPYP00000013623	ENSPPYP00000024168	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	TAF1C isoform 10.	0.713
POLR1A	TAF1D	ENSPPYP00000013623	ENSPPYP00000004318	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	TATA box-binding protein-associated factor RNA polymerase I subunit D; Component of the transcription factor SL1/TIF-IB complex, which is involved in the assembly of the PIC (preinitiation complex) during RNA polymerase I-dependent transcription. The rate of PIC formation probably is primarily dependent on the rate of association of SL1/TIF-IB with the rDNA promoter. SL1/TIF-IB is involved in stabilization of nucleolar transcription factor 1/UBTF on rDNA. Formation of SL1/TIF-IB excludes the association of TBP with TFIID subunits (By similarity).	0.577
POLR1A	TBP	ENSPPYP00000013623	ENSPPYP00000019257	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	TBP isoform 3.	0.727
POLR1A	TBPL2	ENSPPYP00000013623	ENSPPYP00000006636	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	TATA-box binding protein like 2.	0.727
POLR1A	TWISTNB	ENSPPYP00000013623	ENSPPYP00000019898	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	TWISTNB isoform 1.	0.996
POLR1E	ENSPPYP00000008208	ENSPPYP00000021361	ENSPPYP00000008208	RNA polymerase I subunit E.	annotation not available	0.959
POLR1E	POLR1A	ENSPPYP00000021361	ENSPPYP00000013623	RNA polymerase I subunit E.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999