Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ASB8 | SCRN3 | ENSP00000445622 | ENSP00000272732 | Ankyrin repeat and SOCS box protein 8; May be a substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. | Secernin-3; Secernin 3. | 0.441 |
FBXL4 | SCRN3 | ENSP00000358247 | ENSP00000272732 | F-box and leucine rich repeat protein 4. | Secernin-3; Secernin 3. | 0.436 |
FBXL4 | VPS50 | ENSP00000358247 | ENSP00000307666 | F-box and leucine rich repeat protein 4. | Syndetin; Acts as component of the EARP complex that is involved in endocytic recycling. The EARP complex associates with Rab4-positive endosomes and promotes recycling of internalized transferrin receptor (TFRC) to the plasma membrane. Within the EARP complex, required to tether the complex to recycling endosomes. Not involved in retrograde transport from early and late endosomes to the trans-Golgi network (TGN). | 0.443 |
HBM | SCRN3 | ENSP00000349270 | ENSP00000272732 | Hemoglobin subunit mu. | Secernin-3; Secernin 3. | 0.422 |
MAGOH | SCRN3 | ENSP00000360525 | ENSP00000272732 | Protein mago nashi homolog; Required for pre-mRNA splicing as component of the spliceosome. Plays a redundant role with MAGOHB as core component of the exon junction complex (EJC) and in the nonsense- mediated decay (NMD) pathway. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components re [...] | Secernin-3; Secernin 3. | 0.544 |
SCRN3 | ASB8 | ENSP00000272732 | ENSP00000445622 | Secernin-3; Secernin 3. | Ankyrin repeat and SOCS box protein 8; May be a substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. | 0.441 |
SCRN3 | FBXL4 | ENSP00000272732 | ENSP00000358247 | Secernin-3; Secernin 3. | F-box and leucine rich repeat protein 4. | 0.436 |
SCRN3 | HBM | ENSP00000272732 | ENSP00000349270 | Secernin-3; Secernin 3. | Hemoglobin subunit mu. | 0.422 |
SCRN3 | MAGOH | ENSP00000272732 | ENSP00000360525 | Secernin-3; Secernin 3. | Protein mago nashi homolog; Required for pre-mRNA splicing as component of the spliceosome. Plays a redundant role with MAGOHB as core component of the exon junction complex (EJC) and in the nonsense- mediated decay (NMD) pathway. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components re [...] | 0.544 |
SCRN3 | SMYD1 | ENSP00000272732 | ENSP00000393453 | Secernin-3; Secernin 3. | Histone-lysine N-methyltransferase SMYD1; Methylates histone H3 at 'Lys-4' (H3K4me), seems able to perform both mono-, di-, and trimethylation. Acts as a transcriptional repressor. Essential for cardiomyocyte differentiation and cardiac morphogenesis; Belongs to the class V-like SAM-binding methyltransferase superfamily. | 0.428 |
SCRN3 | TCAIM | ENSP00000272732 | ENSP00000341539 | Secernin-3; Secernin 3. | T-cell activation inhibitor, mitochondrial; May regulate T-cell apoptosis. | 0.474 |
SCRN3 | VPS50 | ENSP00000272732 | ENSP00000307666 | Secernin-3; Secernin 3. | Syndetin; Acts as component of the EARP complex that is involved in endocytic recycling. The EARP complex associates with Rab4-positive endosomes and promotes recycling of internalized transferrin receptor (TFRC) to the plasma membrane. Within the EARP complex, required to tether the complex to recycling endosomes. Not involved in retrograde transport from early and late endosomes to the trans-Golgi network (TGN). | 0.444 |
SCRN3 | ZNF227 | ENSP00000272732 | ENSP00000482749 | Secernin-3; Secernin 3. | Zinc finger protein 227; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family. | 0.439 |
SCRN3 | ZNF639 | ENSP00000272732 | ENSP00000325634 | Secernin-3; Secernin 3. | Zinc finger protein 639; Binds DNA and may function as a transcriptional repressor. Belongs to the krueppel C2H2-type zinc-finger protein family. | 0.419 |
SMYD1 | SCRN3 | ENSP00000393453 | ENSP00000272732 | Histone-lysine N-methyltransferase SMYD1; Methylates histone H3 at 'Lys-4' (H3K4me), seems able to perform both mono-, di-, and trimethylation. Acts as a transcriptional repressor. Essential for cardiomyocyte differentiation and cardiac morphogenesis; Belongs to the class V-like SAM-binding methyltransferase superfamily. | Secernin-3; Secernin 3. | 0.428 |
TCAIM | SCRN3 | ENSP00000341539 | ENSP00000272732 | T-cell activation inhibitor, mitochondrial; May regulate T-cell apoptosis. | Secernin-3; Secernin 3. | 0.474 |
VPS50 | FBXL4 | ENSP00000307666 | ENSP00000358247 | Syndetin; Acts as component of the EARP complex that is involved in endocytic recycling. The EARP complex associates with Rab4-positive endosomes and promotes recycling of internalized transferrin receptor (TFRC) to the plasma membrane. Within the EARP complex, required to tether the complex to recycling endosomes. Not involved in retrograde transport from early and late endosomes to the trans-Golgi network (TGN). | F-box and leucine rich repeat protein 4. | 0.443 |
VPS50 | SCRN3 | ENSP00000307666 | ENSP00000272732 | Syndetin; Acts as component of the EARP complex that is involved in endocytic recycling. The EARP complex associates with Rab4-positive endosomes and promotes recycling of internalized transferrin receptor (TFRC) to the plasma membrane. Within the EARP complex, required to tether the complex to recycling endosomes. Not involved in retrograde transport from early and late endosomes to the trans-Golgi network (TGN). | Secernin-3; Secernin 3. | 0.444 |
ZNF227 | SCRN3 | ENSP00000482749 | ENSP00000272732 | Zinc finger protein 227; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family. | Secernin-3; Secernin 3. | 0.439 |
ZNF639 | SCRN3 | ENSP00000325634 | ENSP00000272732 | Zinc finger protein 639; Binds DNA and may function as a transcriptional repressor. Belongs to the krueppel C2H2-type zinc-finger protein family. | Secernin-3; Secernin 3. | 0.419 |