Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
H4-16 | H4C1 | ENSP00000443017 | ENSP00000479106 | H4 histone 16. | H4 clustered histone 1. | 0.954 |
H4-16 | H4C11 | ENSP00000443017 | ENSP00000347168 | H4 histone 16. | H4 clustered histone 11. | 0.954 |
H4-16 | H4C14 | ENSP00000443017 | ENSP00000462667 | H4 histone 16. | H4 clustered histone 14. | 0.953 |
H4-16 | H4C15 | ENSP00000443017 | ENSP00000462355 | H4 histone 16. | H4 clustered histone 15. | 0.952 |
H4-16 | H4C2 | ENSP00000443017 | ENSP00000366974 | H4 histone 16. | H4 clustered histone 2. | 0.970 |
H4-16 | H4C3 | ENSP00000443017 | ENSP00000367034 | H4 histone 16. | H4 clustered histone 3. | 0.954 |
H4-16 | H4C4 | ENSP00000443017 | ENSP00000479461 | H4 histone 16. | H4 clustered histone 4. | 0.955 |
H4-16 | H4C6 | ENSP00000443017 | ENSP00000244537 | H4 histone 16. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.969 |
H4-16 | N6AMT1 | ENSP00000443017 | ENSP00000303584 | H4 histone 16. | Methyltransferase N6AMT1; Methyltransferase that can methylate both proteins and DNA, and to a lower extent, arsenic. Catalytic subunit of a heterodimer with TRMT112, which catalyzes N5-methylation of Glu residue of proteins with a Gly- Gln-Xaa-Xaa-Xaa-Arg motif (By similarity). Methylates ETF1 on 'Gln-185'; ETF1 needs to be complexed to ERF3 in its GTP-bound form to be efficiently methylated. Also acts as a N(6)-adenine-specific DNA methyltransferase by mediating methylation of DNA on the 6th position of adenine (N(6)- methyladenosine). N(6)-methyladenosine (m6A) DNA is significantly [...] | 0.900 |
H4-16 | TRMT112 | ENSP00000443017 | ENSP00000438349 | H4 histone 16. | Multifunctional methyltransferase subunit TRM112-like protein; Acts as an activator of both rRNA/tRNA and protein methyltransferases. Together with methyltransferase BUD23, methylates the N(7) position of a guanine in 18S rRNA. The heterodimer with HEMK2/N6AMT1 catalyzes N5- methylation of ETF1 on 'Gln-185', using S-adenosyl L-methionine as methyl donor. The heterodimer with ALKBH8 catalyzes the methylation of 5-carboxymethyl uridine to 5-methylcarboxymethyl uridine at the wobble position of the anticodon loop in target tRNA species. Involved in the pre-rRNA processing steps leading to [...] | 0.800 |
H4C1 | H4-16 | ENSP00000479106 | ENSP00000443017 | H4 clustered histone 1. | H4 histone 16. | 0.954 |
H4C1 | H4C11 | ENSP00000479106 | ENSP00000347168 | H4 clustered histone 1. | H4 clustered histone 11. | 0.957 |
H4C1 | H4C14 | ENSP00000479106 | ENSP00000462667 | H4 clustered histone 1. | H4 clustered histone 14. | 0.956 |
H4C1 | H4C15 | ENSP00000479106 | ENSP00000462355 | H4 clustered histone 1. | H4 clustered histone 15. | 0.952 |
H4C1 | H4C2 | ENSP00000479106 | ENSP00000366974 | H4 clustered histone 1. | H4 clustered histone 2. | 0.978 |
H4C1 | H4C3 | ENSP00000479106 | ENSP00000367034 | H4 clustered histone 1. | H4 clustered histone 3. | 0.956 |
H4C1 | H4C4 | ENSP00000479106 | ENSP00000479461 | H4 clustered histone 1. | H4 clustered histone 4. | 0.962 |
H4C1 | H4C6 | ENSP00000479106 | ENSP00000244537 | H4 clustered histone 1. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.971 |
H4C1 | N6AMT1 | ENSP00000479106 | ENSP00000303584 | H4 clustered histone 1. | Methyltransferase N6AMT1; Methyltransferase that can methylate both proteins and DNA, and to a lower extent, arsenic. Catalytic subunit of a heterodimer with TRMT112, which catalyzes N5-methylation of Glu residue of proteins with a Gly- Gln-Xaa-Xaa-Xaa-Arg motif (By similarity). Methylates ETF1 on 'Gln-185'; ETF1 needs to be complexed to ERF3 in its GTP-bound form to be efficiently methylated. Also acts as a N(6)-adenine-specific DNA methyltransferase by mediating methylation of DNA on the 6th position of adenine (N(6)- methyladenosine). N(6)-methyladenosine (m6A) DNA is significantly [...] | 0.900 |
H4C1 | TRMT112 | ENSP00000479106 | ENSP00000438349 | H4 clustered histone 1. | Multifunctional methyltransferase subunit TRM112-like protein; Acts as an activator of both rRNA/tRNA and protein methyltransferases. Together with methyltransferase BUD23, methylates the N(7) position of a guanine in 18S rRNA. The heterodimer with HEMK2/N6AMT1 catalyzes N5- methylation of ETF1 on 'Gln-185', using S-adenosyl L-methionine as methyl donor. The heterodimer with ALKBH8 catalyzes the methylation of 5-carboxymethyl uridine to 5-methylcarboxymethyl uridine at the wobble position of the anticodon loop in target tRNA species. Involved in the pre-rRNA processing steps leading to [...] | 0.800 |
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