Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CRB2 | FAM151A | ENSP00000362734 | ENSP00000306888 | Protein crumbs homolog 2; Apical polarity protein that plays a central role during the epithelial-to-mesenchymal transition (EMT) at gastrulation, when newly specified mesodermal cells move inside the embryo. Acts by promoting cell ingression, the process by which cells leave the epithelial epiblast and move inside the embryo to form a new tissue layer. The anisotropic distribution of CRB2 and MYH10/myosin-IIB at cell edges define which cells will ingress: cells with high apical CRB2 are probably extruded from the epiblast by neighboring cells with high levels of apical MYH10/myosin-II [...] | Protein FAM151A; Family with sequence similarity 151 member A; Belongs to the FAM151 family. | 0.461 |
FAM151A | CRB2 | ENSP00000306888 | ENSP00000362734 | Protein FAM151A; Family with sequence similarity 151 member A; Belongs to the FAM151 family. | Protein crumbs homolog 2; Apical polarity protein that plays a central role during the epithelial-to-mesenchymal transition (EMT) at gastrulation, when newly specified mesodermal cells move inside the embryo. Acts by promoting cell ingression, the process by which cells leave the epithelial epiblast and move inside the embryo to form a new tissue layer. The anisotropic distribution of CRB2 and MYH10/myosin-IIB at cell edges define which cells will ingress: cells with high apical CRB2 are probably extruded from the epiblast by neighboring cells with high levels of apical MYH10/myosin-II [...] | 0.461 |
FAM151A | FETUB | ENSP00000306888 | ENSP00000265029 | Protein FAM151A; Family with sequence similarity 151 member A; Belongs to the FAM151 family. | Fetuin-B; Protease inhibitor required for egg fertilization. Required to prevent premature zona pellucida hardening before fertilization, probably by inhibiting the protease activity of ASTL, a protease that mediates the cleavage of ZP2 and triggers zona pellucida hardening (By similarity). | 0.422 |
FAM151A | PLEKHH3 | ENSP00000306888 | ENSP00000468678 | Protein FAM151A; Family with sequence similarity 151 member A; Belongs to the FAM151 family. | Pleckstrin homology, MyTH4 and FERM domain containing H3. | 0.466 |
FETUB | FAM151A | ENSP00000265029 | ENSP00000306888 | Fetuin-B; Protease inhibitor required for egg fertilization. Required to prevent premature zona pellucida hardening before fertilization, probably by inhibiting the protease activity of ASTL, a protease that mediates the cleavage of ZP2 and triggers zona pellucida hardening (By similarity). | Protein FAM151A; Family with sequence similarity 151 member A; Belongs to the FAM151 family. | 0.422 |
PLEKHH3 | FAM151A | ENSP00000468678 | ENSP00000306888 | Pleckstrin homology, MyTH4 and FERM domain containing H3. | Protein FAM151A; Family with sequence similarity 151 member A; Belongs to the FAM151 family. | 0.466 |