C12orf40 protein (human) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Homo sapiens

NCBI taxonomy Id: 9606
Other names: H. sapiens, human, man

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C12orf40	C9orf131	ENSP00000317671	ENSP00000308279	Uncharacterized protein C12orf40; Chromosome 12 open reading frame 40.	Uncharacterized protein C9orf131; Chromosome 9 open reading frame 131.	0.619
C12orf40	C9orf43	ENSP00000317671	ENSP00000288462	Uncharacterized protein C12orf40; Chromosome 12 open reading frame 40.	Uncharacterized protein C9orf43; Chromosome 9 open reading frame 43.	0.664
C12orf40	DYNLL2	ENSP00000317671	ENSP00000477310	Uncharacterized protein C12orf40; Chromosome 12 open reading frame 40.	Dynein light chain 2, cytoplasmic; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures (By similarity); Belongs to the dynein light chain family.	0.800
C12orf40	ERICH4	ENSP00000317671	ENSP00000367429	Uncharacterized protein C12orf40; Chromosome 12 open reading frame 40.	Glutamate-rich protein 4; Glutamate rich 4.	0.651
C12orf40	FAM209A	ENSP00000317671	ENSP00000360379	Uncharacterized protein C12orf40; Chromosome 12 open reading frame 40.	Protein FAM209A; Family with sequence similarity 209 member A.	0.599
C12orf40	MAGEB16	ENSP00000317671	ENSP00000382871	Uncharacterized protein C12orf40; Chromosome 12 open reading frame 40.	Melanoma-associated antigen B16; MAGE family member B16.	0.590
C12orf40	PKDREJ	ENSP00000317671	ENSP00000253255	Uncharacterized protein C12orf40; Chromosome 12 open reading frame 40.	Polycystic kidney disease and receptor for egg jelly-related protein; May have a central role in fertilization. May generate a Ca(2+) transporting channel directly involved in initiating the acrosome reaction of the sperm; Belongs to the polycystin family.	0.542
C12orf40	TMCO5A	ENSP00000317671	ENSP00000327234	Uncharacterized protein C12orf40; Chromosome 12 open reading frame 40.	Transmembrane and coiled-coil domains 5A; Belongs to the TMCO5 family.	0.592
C12orf40	TULP2	ENSP00000317671	ENSP00000221399	Uncharacterized protein C12orf40; Chromosome 12 open reading frame 40.	TUB like protein 2; Belongs to the TUB family.	0.537
C12orf40	ZFAND4	ENSP00000317671	ENSP00000339484	Uncharacterized protein C12orf40; Chromosome 12 open reading frame 40.	Zinc finger AN1-type containing 4.	0.542
C9orf131	C12orf40	ENSP00000308279	ENSP00000317671	Uncharacterized protein C9orf131; Chromosome 9 open reading frame 131.	Uncharacterized protein C12orf40; Chromosome 12 open reading frame 40.	0.619
C9orf131	C9orf43	ENSP00000308279	ENSP00000288462	Uncharacterized protein C9orf131; Chromosome 9 open reading frame 131.	Uncharacterized protein C9orf43; Chromosome 9 open reading frame 43.	0.632
C9orf131	FAM209A	ENSP00000308279	ENSP00000360379	Uncharacterized protein C9orf131; Chromosome 9 open reading frame 131.	Protein FAM209A; Family with sequence similarity 209 member A.	0.649
C9orf131	MAGEB16	ENSP00000308279	ENSP00000382871	Uncharacterized protein C9orf131; Chromosome 9 open reading frame 131.	Melanoma-associated antigen B16; MAGE family member B16.	0.574
C9orf131	PKDREJ	ENSP00000308279	ENSP00000253255	Uncharacterized protein C9orf131; Chromosome 9 open reading frame 131.	Polycystic kidney disease and receptor for egg jelly-related protein; May have a central role in fertilization. May generate a Ca(2+) transporting channel directly involved in initiating the acrosome reaction of the sperm; Belongs to the polycystin family.	0.537
C9orf131	TMCO5A	ENSP00000308279	ENSP00000327234	Uncharacterized protein C9orf131; Chromosome 9 open reading frame 131.	Transmembrane and coiled-coil domains 5A; Belongs to the TMCO5 family.	0.656
C9orf131	TULP2	ENSP00000308279	ENSP00000221399	Uncharacterized protein C9orf131; Chromosome 9 open reading frame 131.	TUB like protein 2; Belongs to the TUB family.	0.572
C9orf131	ZFAND4	ENSP00000308279	ENSP00000339484	Uncharacterized protein C9orf131; Chromosome 9 open reading frame 131.	Zinc finger AN1-type containing 4.	0.544
C9orf43	C12orf40	ENSP00000288462	ENSP00000317671	Uncharacterized protein C9orf43; Chromosome 9 open reading frame 43.	Uncharacterized protein C12orf40; Chromosome 12 open reading frame 40.	0.664
C9orf43	C9orf131	ENSP00000288462	ENSP00000308279	Uncharacterized protein C9orf43; Chromosome 9 open reading frame 43.	Uncharacterized protein C9orf131; Chromosome 9 open reading frame 131.	0.632